KEGG   Arabidopsis thaliana (thale cress): AT5G26742
Entry
AT5G26742         CDS       T00041                                 
Symbol
emb1138
Name
(RefSeq) DEAD box RNA helicase (RH3)
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII zf-CCHC CMS1 ERCC3_RAD25_C zf-CCHC_2 Cas3-like_C_2 P-loop_SecA YgbB
Other DBs
NCBI-GeneID: 832713
NCBI-ProteinID: NP_001031943
TAIR: AT5G26742
UniProt: Q8L7S8 A0A178UT03
Position
5:complement(9284557..9289003)
AA seq 748 aa
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL
PKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRII
DLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKL
ARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQT
KRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVD
LVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPT
VGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSR
SLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAV
FDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGS
RGGRGGSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPS
RERSFGGSCFICGKSGHRATDCPDKRGF
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggcgtcgacggtaggagttccatcactataccaagttcctcaccttgaaatctccaaa
cccaattccaaaaagaggtctaattgtttatctttatctctcgataagcctttcttcact
cccttatctcttgttcgtagaactcgtcgtatccattcctcttctcttcttgttccttct
gctgttgctactcctaattctgttctcagtgaagaagctttcaaaagtcttggtctttct
gaccatgacgaatatgaccttgacggcgacaacaacaacgttgaagctgatgatggtgaa
gaactcgctatctctaaacttagtttgcctcaacgtcttgaagagtctcttgagaaacgt
ggtatcactcatctcttccccattcagagagctgtgttggtacctgcactgcaaggaaga
gatattatagctcgtgcaaagacaggaactggaaagactttggcttttggtattcctatc
attaaacgtctcactgaagaagctggagactacactgctttcaggaggtctggtcgtctt
cctaagttccttgtccttgcgccgacccgagagctggctaagcaagtggagaaggagatt
aaggagtctgcaccttatttgagcactgtttgtgtgtatgggggagtttcttataccatt
cagcagagtgctttaactcgtggtgttgatgttgttgttggaactcctggaagaatcatt
gatttgattgaaggaaggagtcttaaattgggagaagttgagtatttggtacttgatgaa
gctgatcagatgcttgctgttgggtttgaggaggccgtggaatcgattcttgagaatctt
ccaactaagcgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttg
gcgaggaagtaccttgacaatcccttgaatattgatctggttggagaccaagatgagaag
ctcgcagagggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactatt
ctaagcgaccttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaact
aaaagagatgcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcactt
catggagatatatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaa
ttcaccgtattagttgccactgatgttgcatctcgtggacttgacatcccgaacgtagat
ctagttatccactatgaacttcctaatgacccagaaacttttgtgcaccgttctggtcgt
actgggcgtgcagggaaagaaggctctgccattctcatgcacaccagcagccaaaagaga
acagtgaggtctctggagcgtgacgtaggctgccattttgaattcattagcccaccaact
gttggagacttgttggaatcgtcagcagaccaagtggtggccactctaaatggtgttcac
cctgactccataaagtttttctcagcaactgctcaaaaactatatgaggagaaaggaaca
gatgctttagctgcagctctagctcacctgagtggtttctctcagccgccttcatcaaga
tctctcctcagccatgagaagggatgggtgactttgcaattgatccgagatccaacgaac
gctagaggctttctgtctgcgaggtctgttactggttttctttccgatctttaccgtaca
gctgcagatgaagttggaaaaatcttcttgatcgccgatgacaggatccaaggagctgta
tttgatctaccagaggagatcgcgaaagagctcctagagaaagatgtccccgaaggcaac
agtttatccatgataacaaagttacctccacttcaagatgacggaccatctagtgataac
tacggacggttctctagcagagacaggatgcctagaggaggaggaggttctagagggtca
agaggcggtagaggaggatcatcacgaggccgtgatagttggggaggtgatgatgacaga
ggtagtagaaggagcagtggtggaggaagcagctggtcccgaggtggtagtagttccaga
ggaagttctgatgattggttgatcggtggcagaagttcatcaagcagcagagctccttcg
cgggagagaagttttggaggttcatgcttcatttgtgggaaatctggacacagggcaaca
gattgtcctgataagagaggattttag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (8)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (59)   

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