KEGG   Arabidopsis thaliana (thale cress): AT5G37930
Entry
AT5G37930         CDS       T00041                                 
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT5G37930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G37930
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT5G37930
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    AT5G37930
SSDB
Motif
Pfam: Sina_ZnF Sina_RING DUF1644
Other DBs
NCBI-GeneID: 833772
NCBI-ProteinID: NP_198609
TAIR: AT5G37930
UniProt: Q84K34
Position
5:complement(15102065..15103730)
AA seq 349 aa
MARFSVCGGDDGEGPSNNNHQSRKRQRLPSIDENEEDAETSDAGSSGEEDEDETQNQGMR
PESEDRGSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPL
KIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKE
STSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISL
DLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLK
QGFMVKNIQKVTNEHPEDGFMLIPSYLFSGNDNLNLQIWIGHGRIFVHS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcgagattctcagtttgcggaggagacgacggagaaggaccaagtaacaacaatcac
caatcccggaaaaggcaacgacttccttcaatcgatgaaaatgaagaagacgccgagacc
tccgacgccggaagttccggtgaagaagacgaagacgaaactcagaatcaaggaatgaga
ccagaatctgaggatcgaggatcaacgagcgatgatagcgatcgtgaagttgtgattgag
gagagacgatttggtaaatttgtaaatagtcagagttcttcttctagcaaagattcgcct
ctttctgtaacgttattggatccagatgttcttgattgtcctatttgttgcgagccattg
aagattcctatctttcagtgtgataatggtcatctggcttgtactttgtgctgcaccaaa
gtgaggaacagatgcccgtcgtgtacattaccgataggttatgttcgttgcagagctatg
gagaaggttatagaagcatctagagtctcgtgtctaaatgccaaatacgggtgcaaggag
agtacctcctatggaaaccgttttagtcatgagcaggtatgtgttttcaccccttgttct
tgccccatacttgactgccactacactgggtattacaaggatctcaacaatcacgtccgt
gctgaacacaaagatgatctgatctcgttcgtgtggaatactcgtttaaccattagcttg
gacctcaataagaagaccacaattcttcaggaagaaaacgatgggcatgtgattgtagtc
caagttttcagggctttgcatgctgtgtatgtcagtgtgagctgtattgcacctttgaca
ccgggagtgggtaggttatcatgccgtcttgcgaagataaccgttgatagcttactgaag
caaggatttatggtgaagaacatacaaaaagtgacgaatgaacatcccgaagatggtttc
atgttgattccttcctatttgttctctggtaatgacaacttgaatctgcagatttggatc
ggccatggccggatctttgttcattcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

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