KEGG   Arabidopsis thaliana (thale cress): AT5G40410
Entry
AT5G40410         CDS       T00041                                 
Name
(RefSeq) Tetratricopeptide repeat (TPR)-like superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR PPR_2 DYW_deaminase E_motif PPR_1 PPR_3 Eplus_motif PPR_long
Other DBs
NCBI-GeneID: 834039
NCBI-ProteinID: NP_198857
TAIR: AT5G40410
UniProt: Q9FND6 A0A5S9Y9K3
Position
5:16171374..16173354
AA seq 608 aa
MIKANVYSCSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKS
VSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVL
SRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYG
KTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLA
VLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD
SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE
TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDT
QLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEH
GNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQH
SEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDG
SCSCSDYW
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgatcaaagcaaatgtgtattcatgttcaaagttcagatttttatatcgtcggagattt
ttgagccaatctagttttgttcatagtttagatgcaaatgtttcatcacttatagctgct
gtaaagtcttgtgtctccattgaactgtgtcgtttgcttcattgtaaagtagtgaagagt
gtgagttaccgccatggatttattggggaccagcttgttggttgttacttgagattgggt
catgatgtttgtgcagagaagctgttcgatgaaatgcctgagagagatttagtctcttgg
aactctttaatatctgggtattcagggagaggttatttggggaaatgttttgaggtgttg
tctaggatgatgatatctgaggtgggttttagacctaatgaagttacgtttttgtcgatg
atctcggcttgtgtttacgggggaagtaaggaagaaggacgttgtattcatgggttggtg
atgaaatttggtgtacttgaggaagttaaagttgtgaatgcttttatcaattggtatgga
aagactggagatttgacttcatcctgcaaattgtttgaggatttgagtataaagaatttg
gtttcttggaatacgatgattgtgattcacttgcagaacggtttagctgaaaaaggtctg
gcttactttaacatgagcagaagggttgggcacgagcctgatcaagccacttttctggct
gttctccgtagctgtgaagacatgggtgtagtgagattggcgcaaggaattcatgggcta
atcatgtttggtgggttcagtggaaacaagtgtataacgacagcgttattagacttgtat
tcgaaacttgggaggttggaggattcgtctacggtttttcatgagattacttctccagat
agtatggcgtggactgcaatgcttgctgcttatgccactcatgggtttggaagagatgca
atcaagcattttgagctcatggttcactatggtattagtcctgatcatgtaaccttcact
cacttgttaaatgcttgtagtcattctggtcttgtagaagaagggaagcattatttcgaa
acaatgtcgaaaagatacaggattgacccgaggttagatcactattcatgtatggttgat
ctactgggtcgatccgggcttctccaagatgcttatggattgatcaaagaaatgccaatg
gagcctagttctggtgtttggggagctttgcttggtgcttgtagggtttacaaagataca
caactcggaacaaaagccgcagagagattgttcgaattagagcctcgtgatggtagaaac
tatgtaatgctctcaaacatctattcagcttctggtctatggaaagatgcttcaagaata
aggaatctgatgaaacagaaaggtcttgtaagagcttcagggtgtagctacattgaacat
ggtaacaaaattcataagtttgttgttggagattggtctcatcctgaatcagagaagata
caaaagaagctgaaagagattaggaagaagatgaagagtgaaatgggatataaatcaaaa
acagagtttgtattacatgatgttggtgaagatgttaaagaggaaatgatcaatcaacat
agtgagaagattgcgatggcgtttgggcttttggtggttagtccaatggagccaattatc
ataaggaagaatcttagaatttgtggggattgtcatgaaacagcaaaagcaatatctttg
atcgagaaaaggagaatcattattagagattctaagaggtttcatcatttcttagacgga
tcatgctcttgtagcgattattggtag

  All links  
Gene (22)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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