KEGG T00041: AT5G44560

Arabidopsis thaliana (thale cress): AT5G44560

Entry

AT5G44560         CDS       T00041

Symbol

VPS2.2

Name

(RefSeq) SNF7 family protein

K12191

charged multivesicular body protein 2A

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:ath00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G44560 (VPS2.2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G44560 (VPS2.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G44560 (VPS2.2)
Membrane trafficking [BR:ath04131]
Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT5G44560 (VPS2.2)
Exosome [BR:ath04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT5G44560 (VPS2.2)
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G44560 (VPS2.2)
  Exosomal proteins of colorectal cancer cells
   AT5G44560 (VPS2.2)

SSDB

Motif

Pfam:

Snf7 YlqD DUF4400 Flagellin_C MerR-DNA-bind GAS

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

TAIR:

UniProt:

Position

5:17945923..17948400

AA seq 222 aa
MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK
QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS
APKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLRRI

NT seq 669 nt +upstreamnt +downstreamnt
atgaacattttcaagaagaagaccactcccaaagatgctcttcgtactagtaagagagaa
atggctgttgctactcgaggtatcgaacgggagattacatctcttcaactagaggagaag
agactagttgcagaaatcaagaaaacagctaagactggaaatgaggctgccacaaagatt
ttagctcgtcaacttgttcgattgaggcaacagattaccaacttacaaggaagccgtgct
cagattaggggtgtaacaactcatacacaggctctgtatgccagcacttcgatttcatct
ggtatgaaaggtgctaccaaagctatggttgcaatgaacaagcaaatggcaccaacgaaa
caagccaaggtgattaaagatttccaaaagcagtcggcacagctagacatgacgatagag
atgatgtcagaggcaattgatgaaacacttgacaaagatgaggctgaagaagaaacagaa
gatctcactaaccaggttcttgatgagattggtgttggtgttgcatctcagttatcttca
gctccaaaaggtcggattgctacgaaaaccgcagctcctcccgcttccactgcagctact
aacaagaactctgaatcaagtgaagtggatgagcttgagaagaggttggcttcgctacga
cgaatctga

All links

Gene (9)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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