KEGG   Arabidopsis thaliana (thale cress): AT5G48910
Entry
AT5G48910         CDS       T00041                                 
Symbol
LPA66
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR PPR_2 DYW_deaminase PPR_1 PPR_3 E_motif PPR_long Eplus_motif GxGYxYP_N_3rd
Other DBs
NCBI-GeneID: 834949
NCBI-ProteinID: NP_199702
TAIR: AT5G48910
UniProt: Q9FI80 A0A654G9J2
Position
5:complement(19832785..19835148)
AA seq 646 aa
MNPTQTLFSPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAE
ILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMS
DEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMK
DARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV
SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA
EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAI
DCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDL
LGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAY
VALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEIN
SMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIV
KNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgaacccaacacagacacttttctctcccggcggtaactcgccggcgtcttctccggcg
agtcatccatcttcactctttcctcaaatcaacaactgtcgaactataagagacctctct
caaatccatgccgttttcattaaatctggtcaaatgcgagacactctcgccgccgcagag
attctccgattctgtgctacctccgatctccaccaccgtgaccttgactacgcacataag
atctttaatcaaatgcctcaacgaaattgcttctcttggaatactataatcagaggtttc
agtgagagtgacgaagacaaagctctgatcgcaatcacattattctacgagatgatgagt
gatgagtttgttgaaccgaatcggtttacgtttccctctgttcttaaggcttgtgcgaaa
actgggaagattcaagaaggtaagcagattcatggtttggctttgaagtatggatttggt
ggtgatgaatttgtgatgagtaatcttgttagaatgtatgtgatgtgtggttttatgaaa
gatgctcgtgtgttgttttataagaacattatagagaaagatatggtggtgatgactgat
agaagaaagagagatggtgaaatagttttgtggaatgttatgattgatggttatatgaga
cttggtgattgtaaagctgcacggatgttgtttgataaaatgcgtcaaagaagcgttgtt
tcgtggaatacgatgatatcgggttattcgctgaacgggtttttcaaagatgctgttgag
gtttttcgtgagatgaagaaaggggatattagaccgaattatgttactttggttagtgtt
cttcctgctatttcacggcttgggtctttagagttgggagaatggttgcatttgtatgca
gaggatagtggaattaggattgatgatgtgcttggctctgctttgattgatatgtattcg
aaatgtgggatcattgagaaagcgattcatgtatttgagaggttacctagagagaacgtg
attacttggagtgcgatgattaacgggtttgctatacatggccaggcaggtgatgctatt
gactgtttttgtaaaatgaggcaggctggagttcgacctagtgatgttgcctacattaat
cttttgactgcttgtagccatggcgggttggtagaagaaggaaggagatatttcagtcag
atggtgagtgtggatggtttagagcctaggattgaacactacgggtgtatggttgattta
ttgggtcgttcgggtcttcttgatgaggctgaggagtttatacttaatatgcctataaaa
ccagatgatgtgatatggaaagcacttttgggtgcttgcagaatgcagggaaatgtcgag
atgggcaagcgcgttgccaatattctgatggatatggttcctcatgacagtggagcttat
gtcgccctctcaaacatgtatgcttctcaaggaaactggtcagaggtttcagagatgagg
ctgagaatgaaggagaaggatataagaaaagaccctgggtgtagtttgatcgacattgat
ggcgtgcttcatgagtttgttgtggaagatgattcacacccaaaagccaaagaaatcaac
tcaatgctcgtagaaatctcagacaaactgagactagctgggtatagaccaatcaccaca
caggttttgttaaacttggaggaagaagataaagaaaatgtacttcattaccacagcgag
aagatcgctacagcgtttgggttgataagcacgagccctggcaaaccaatacgcattgtt
aagaacctacgtatctgtgaggattgtcattcgtccatcaaactcatctccaaagtttac
aagagaaaaataacggtacgagaccggaaacgttttcaccatttccaagatggctcatgc
tcgtgtatggattattggtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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