KEGG   Anaerolinea thermophila: ANT_02220
Entry
ANT_02220         CDS       T01410                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
atm  Anaerolinea thermophila
Brite
KEGG Orthology (KO) [BR:atm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:atm03016]
    ANT_02220 (truB)
Enzymes [BR:atm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ANT_02220 (truB)
Transfer RNA biogenesis [BR:atm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ANT_02220 (truB)
 Prokaryotic type
    ANT_02220 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C DKCLD DUF2126 YbjN TruB-C_2
Other DBs
NCBI-ProteinID: BAJ62256
UniProt: E8MZB3
Position
complement(249081..250004)
AA seq 307 aa
MMENPMDVRNTVSGVLVVDKPVGMTSHDVVQIIRKGTNIRRAGHTGTLDPRASGVLVVLI
GPAVRLSEYVSASDKRYQAIIRLGTSTDTYDADGRITGSGSVPVESITEEQFEQALQQFV
GEIEQVPPPYSAIKVQGRKAYEMAREGEEVDLAPRKIKVYSLELLEWAPPEAVVDIYCSS
GTYVRSLAHDLGQVLGCGAHLVGLRRTKSGRFTLRDAVPLRKLREAFQDGTWYQYLIPAA
EALADWPALELTDKQVEEVRHGHRIPAEEPVPGNMVRGVSVLGELVALLEYLPEENLWQP
RKVFFQS
NT seq 924 nt   +upstreamnt  +downstreamnt
atgatggaaaacccaatggacgttcgcaatacggtttcgggggtgctggtagtggataaa
ccggtcggcatgacttcgcacgacgtggtgcagatcatccgcaaaggcaccaacattcgc
cgtgccgggcacaccggcacgctggacccgcgcgcctcgggcgtgctggtcgttctcatt
ggtccggcggtgcgcctgagcgagtacgtttcggcttccgataagcgctaccaggccatc
atccggctgggcacaagcaccgatacctacgacgccgatgggcggattaccggctccggc
tcggtgccggtagagagcatcaccgaagagcagttcgagcaagccctgcaacagtttgtg
ggcgaaatcgaacaggtaccgccaccctactcggcaatcaaggtacagggacgcaaagcc
tacgagatggcacgcgaaggcgaagaggtagacctggcgccgcgcaagatcaaagtgtac
agcctggaactgctggaatgggcgccgcccgaggcagtggtggacatttactgctcctcg
gggacgtatgtgcgctcgctggcgcacgatttggggcaggtgctggggtgcggcgcgcac
ctggtaggcttacggcgcaccaaaagcgggcgctttaccctgcgcgatgccgtgcctctg
cgcaaactgcgcgaagccttccaggacggcacctggtatcagtacctcatccctgccgcc
gaagccctggcagactggcccgccctggaactgaccgacaagcaggttgaggaagtgcga
catgggcaccgcatccccgccgaagagccggtgccgggcaacatggtgcgcggcgtcagc
gtgctgggtgaactggtggcactgctggagtacctgcccgaggaaaacctctggcaaccc
cgcaaggtgttcttccagtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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