KEGG   Acetobacter tropicalis: CIW82_16610
Entry
CIW82_16610       CDS       T05181                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
ato  Acetobacter tropicalis
Pathway
ato02024  Quorum sensing
ato03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ato00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIW82_16610
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIW82_16610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ato03019]
    CIW82_16610
   03036 Chromosome and associated proteins [BR:ato03036]
    CIW82_16610
Messenger RNA biogenesis [BR:ato03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CIW82_16610
Chromosome and associated proteins [BR:ato03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CIW82_16610
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: ATJ92047
UniProt: A0A094YM55
Position
complement(3621276..3621560)
AA seq 94 aa
MEKETGYNVQDAFLSQIRRSRASVTVFLVNGVKLQGNITWFDETTVLLKRDEHTQLIYKH
AISTVMPSIPVNIFETPASGASADREATLGDDFI
NT seq 285 nt   +upstreamnt  +downstreamnt
gtggaaaaggaaaccgggtataacgtgcaagatgcgtttttgagccagattcgtcgctca
cgtgcgtctgttacggtatttttggtcaatggcgtcaaattacagggcaacattacgtgg
tttgacgagacgaccgttctgctaaagcgggacgagcatacccagctcatttacaagcat
gccatcagcacggtcatgccttccataccagtcaatatatttgaaaccccggcgtctggc
gcgtcggcagacagagaagcaactcttggcgacgactttatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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