KEGG   Amborella trichopoda: 18424129
Entry
18424129          CDS       T02990                                 
Name
(RefSeq) long chain base biosynthesis protein 2a isoform X1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
atr  Amborella trichopoda
Pathway
atr00600  Sphingolipid metabolism
atr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    18424129
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:atr01007]
    18424129
Enzymes [BR:atr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     18424129
Amino acid related enzymes [BR:atr01007]
 Aminotransferase (transaminase)
  Class II
   18424129
SSDB
Motif
Pfam: Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Aminotran_5 OKR_DC_1
Other DBs
NCBI-GeneID: 18424129
NCBI-ProteinID: XP_006828786
UniProt: W1NK89
Position
Unknown
AA seq 487 aa
MITIPYVTALTTLFSYGLLFVFGQFRDLFRKLWRRISSKKELYAPIVLENEDFYTRRLYL
RIQDCFGRPISSAPDSWFDLVERYSTDCNKTLIRTSKTRRCLNLGSYNYLGFASSDEYCT
PRAIESLKRYSPSTCSNRVDAGTTNLHTEVEELVASFVGKPSAVVFGMGYATNSAIIPVL
IGKGGLIISDSLNHSSIVNGARGSGATIRVFRHNTPLHLEEVLREAIAEGLPRTHRPWKK
IIVIVEGIYSMEGELCQLPEIVAVCKKYKAYIYLDEAHSIGAVGKSGRGVCELLGVDPAD
IDVMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSMSPPAVQQVISAIKVILGE
DGSNRGAQKLVRVRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRGCLEE
DVAVVTVAFPATPLLLARARICISASHTREDLIRGLEVISQIGDLIGIKYLPMEPEKQHL
EDREKLE
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgattacgattccttatgtaacagcgttaacaactctgtttagctatggtttgctcttt
gtatttggccagtttagagacctgttcaggaaactatggagacggatctcgtccaagaaa
gagttgtatgcacctattgtcctagagaatgaggatttctacacgcgccggctttatctt
cgcattcaggactgttttggacgcccaatctcaagtgcacctgattcttggtttgatttg
gttgagcgttactcaacagactgtaacaaaacgctaatacggacttcaaaaacaagaaga
tgccttaacttgggttcctacaattatcttggatttgcatcctcagatgagtactgcaca
ccacgtgcaattgagtcattgaagagatattcacctagcacttgcagtaaccgtgttgat
gccggcacaaccaatttgcacacagaagttgaggaattagttgctagttttgttgggaag
ccctcagctgtggtctttggcatgggctatgcgacgaactcagccattattcctgtcctt
attggaaaggggggattgataattagtgactcattgaaccatagttctattgttaatggt
gctcgtggatcaggtgctacaattagggttttccgacacaatacaccattgcacttggag
gaagttctaagagaagcaatagccgaagggcttccaagaactcatcgaccatggaaaaag
ataattgtgattgtagaaggaatctatagcatggagggggaactctgccaacttccagag
atagtagcagtctgtaagaaatataaggcctacatatatctagatgaggctcacagcatt
ggagcagttggtaagtcaggaagaggggtttgtgagctccttggggtggatcctgctgat
attgacgtcatgatgggaactttcaccaagtcttttggatcatgtgggggatacattgct
ggatccaaggaactcattcaatatttgaagtatacgtgtccagcacatctatatgcaaca
tccatgtcgccacctgctgtacaacaagttatttctgccattaaagtcattctaggagag
gatggttctaatagaggggctcagaagcttgtgcgagtacgtgagaacagcaattttttc
agatcggaactaaagaagatgggatttgaggttttgggtgataatgactctccagtaatg
ccaataatgctttataatccggcaaaaattccagccttctctagggggtgtcttgaggag
gatgttgcggttgtgacagttgcattccctgcaacgccattgcttctggcgagggctcgt
atctgcatatctgcctcccacacaagggaagacctgattagaggactggaggtcataagc
caaatcggtgacctaattggcataaagtatctaccaatggagcccgagaaacaacattta
gaggatagagagaagctggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system