KEGG T02990: 18427319

Amborella trichopoda: 18427319

Entry

18427319          CDS       T02990

Name

(RefSeq) Fanconi anemia group D2 protein homolog isoform X1

K10891

fanconi anemia group D2 protein

Organism

atr Amborella trichopoda

Brite

KEGG Orthology (KO) [BR:atr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atr03400]
    18427319
DNA repair and recombination proteins [BR:atr03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FANCD2-I complex
     18427319

SSDB

Motif

Pfam:

FancD2 FANCI_S2

Other DBs

NCBI-GeneID:

18427319

NCBI-ProteinID:

XP_020518624

Position

Unknown

AA seq 1502 aa
MVFLQRSSGRKRPDTALAGDSHNSLPPTNDNKNKKNRVSNEGEVPVSEEEAMVALLAEAG
CTLCNSGGGLPLVPNDIHKLHKHLEARFSSDPNLIPQFLSGFASYINAPHNLKRVLTSLP
RTEIEHSSSFNSSNSDSLVRILLLVPPIQLGLQHMLLEKLPEYFGMESALLKDDIARLII
SQFCWLDFLVDPKGFADKLMEVLSICPLSLKKDIIGSLPEMLGDKTNEAVVATLEQMLQE
DSDVIVPVLDAFSNLNLNATLQEEVVTIALSCIRTVSMEHLSHLLRFLLLSATPTNVRRI
ISQIREHLKFVGIPDPNATRQKKLKGKMIADGVEVSILEALKSGLRFKDILCDAFLKVIK
SLDNAREHKVIDVWLLMVIYTNGGLLQKTVEKIIKRKVIDGCFGESVFYRCIHGQGMIVQ
DYFSSFLSIGEFLMTCKEQRAREFGIYIYVTLFEEFMDAYSRQEVLGSLITHMGSGIIYE
VNAALETMMVLTSKYPQDLVSISSHINGILDYLEGFSDGHVHKVYEIFSRLALLAHPNSD
IRNSSIANDLLMIVRKQVGNGDLKYKRMGIIGILKIVSSLGEITTSNLISSTQKTNSQEA
LELLKMALDSCRLLPLPLVLLYDELVGLLKCTNLQATIMEWLCKHVGEFESIFLLDLEGG
QLSIKTDKCSGLDGELWMNLDGEVSPICLNVLQLLSSTSQRFSSSLQFLPANFLLLSAVE
RFTNQGSLGGIDALLGCPLYLPSLKYFKGAAWRSLMIKQKQIVCLSLYYAINWIRELLNA
FSTQVAGRTDSVTQVTRDEIATKLLKRLRNLVFLESLLNACLKSCPISLPVLHSSMEHSG
HSLYGKYYHLQSKVNQDETKIVSDKNGKKQTKKKSAVSQVSDVDSRLKQPTILDSFKRAG
ITISQQASKECSSTNASKESTTEDGESQNFDFNELTHLQTSAAPMVLDAQRFKFRPLLVN
CLSVLSLSKAKGSCCSDPAAELGLHLYLVRDFNYKLEFESPRNKSFFTVLSPNCKAPSGL
NGLSIIEFMNKMRPLFSSLKKHLDGAVCVLKEGNDSCGEHWKNECKSAGNPDISYEMVSR
SSVAGSIFKEILCCYAKILSFDDLCSKMNVSILRDLLEALQPAGIPDEFFSDIQPLPSSG
SLEYLYCGAYAFLDGVLNLACSFSFLLATEVLVTLKSLVSSTQLLLEKSSEGNVKNCIES
LPSIIPVLSRRLGTCAQRLLAHEWDAEDLEKDSKSKGETIQNILQIYLDYSDCTFDLVNE
LACKIIPQVPSGKSRTGQDYVSSFPTLSPGVLAVWYRVLHEQNIANLKKLIREIGTQQKS
RTIVGGEAIERSLAKARQSVDVIVSLVNMCKTHDKVFVHAMAVRYTGRFVDSFLKVFDFL
KVHFDAHSDTIIQMFKELQKATRTIQFLCSDAKGSKRTMITSKIPTVKRSMERFLFQVKA
LFHNVSNGCSFWMGNLKHKDLLGQVVSSQVHADRDDENEEGHDEMEDVRGQGMADNVSEE
TE

NT seq 4509 nt +upstreamnt +downstreamnt
atggtgtttttgcaacgctcttcaggtcgcaagaggcctgacactgcgcttgcgggtgat
tcgcacaattctctccctcccaccaacgacaataaaaataagaagaatcgagtctccaat
gaaggagaagtccctgtctcagaggaagaggcgatggttgcgctccttgctgaggcgggg
tgcacactttgcaactctggcggtggtcttccactcgtcccgaacgacattcacaagctc
cataaacacctcgaggcccgcttctcttcggacccaaatctgatcccccaattcctcagt
ggctttgcttcttatataaacgctccccataatctgaagagggttctcacatcactgccg
cggaccgagatagagcactcgtcttcttttaatagtagcaatagtgatagccttgtaagg
atacttctcttggttccgcctatccagcttggcctccaacacatgcttctcgagaagctt
cctgaatattttggaatggagtctgctttgttaaaggatgatatcgcaaggcttatcatc
agccagttttgctggctcgacttccttgtggaccctaagggttttgctgataagttgatg
gaggtgctctcaatttgccccctttcgctgaagaaagacattattggttcactccctgag
atgcttggggataaaaccaatgaggcggttgttgccacacttgagcagatgttgcaggag
gactcagatgtcattgtgcctgttctcgacgctttctccaatctcaacctcaatgctact
cttcaagaagaggtggtcaccattgccctatcttgcattaggactgtcagcatggaacac
ttgtcacacctactgagattcttattactttcggctacacctacaaatgttaggaggata
atatcacagatccgtgaacacttaaaatttgtcggcataccagatcctaatgccaccagg
cagaagaagctcaaaggcaaaatgattgctgatggtgttgaggtttccattcttgaggct
ctgaaatcaggtcttcgtttcaaggatatcctttgtgatgcgttcctgaaagtaattaag
tcccttgataatgcacgtgagcataaggtcattgatgtgtggttgctcatggttatctac
acaaatggaggcttattgcaaaaaacagttgaaaagattataaagaggaaagtaatcgat
ggttgttttggggagtccgtattttatcgatgtattcatggtcaggggatgatcgtccag
gattacttctcatcctttctctccattggtgagttccttatgacatgcaaagaacaaagg
gcacgagaatttggcatttacatttatgtaactctttttgaggaattcatggatgcttac
tctaggcaagaagttctcggctcactgatcacacatatgggttctggcattatttatgaa
gtgaatgccgctctcgagacaatgatggttctgacatcaaaatatccgcaggacctggtt
tcaatatcttcacatataaatggtattctggattatctggaaggttttagtgatgggcat
gtgcacaaggtttatgaaattttcagccgtttggcattgctagctcatcccaattctgat
atccggaattcatccattgccaatgatcttttgatgattgtccgcaaacaggttggaaat
ggggatttgaagtacaaaaggatggggataatcggcatcctgaagatagtttcttctcta
ggagaaataactaccagtaacttgatctcatcgactcagaaaacaaattctcaggaggct
ttagagctgttgaaaatggctttggactcttgtagattgttgcctttacctttggttcta
ttgtatgacgaattagttggcttattgaaatgcacaaaccttcaagctaccataatggaa
tggttgtgcaaacatgttggggagtttgagtcaatatttttgttggatcttgagggaggt
cagttgtcgataaagaccgacaagtgtagtggtttagatggggagttgtggatgaatttg
gatggtgaagtttctccgatttgtttgaatgtcttgcaattactgtcctctacttcgcag
aggttttcatcctccttacaatttcttccagctaactttttattgctgtccgctgttgag
aggttcacaaaccagggctctctaggagggattgatgcacttcttggctgcccattatat
cttccatctttgaagtacttcaagggagctgcttggagatccctgatgataaaacagaag
cagatagtgtgcctttctctctactatgctattaattggataagggaactgctcaatgct
ttctcgacacaagttgctggcagaactgattctgtgactcaagttacaagggatgaaata
gctacaaagttactgaagcgtctaaggaacttggtttttctggaaagcctgttgaatgcc
tgcctcaaatcatgccctatttccctgcctgtgctccactcttctatggagcattctgga
cattctttgtatggaaagtattaccatttacaaagtaaagtaaatcaagatgaaacgaaa
attgtttcagataagaacggaaagaaacaaaccaaaaaaaagtcagcagtctcccaagtt
tcggatgttgattcaaggctcaagcagcctaccattttggattcctttaaacgagcaggg
atcactataagccagcaagcatcgaaggagtgttcctcaacaaacgcatcgaaagaaagt
acaacagaggatggtgaaagccagaactttgatttcaatgagctcacccatttacaaaca
tctgcagccccaatggttttagatgcacaaagatttaagtttaggcctctacttgtcaac
tgcttgtcagttttgtctctttcaaaggcgaaggggtcttgttgttcagatcctgcagcc
gagctgggactgcatctgtatcttgtccgtgatttcaactacaaacttgagtttgagagt
cctcgaaacaaatcattttttactgttctttcaccaaattgcaaggctccatctggtctg
aatgggctgtccatcattgaatttatgaacaagatgaggccgttattttcaagccttaag
aaacatcttgatggtgctgtttgtgttctcaaagaaggaaatgacagctgtggtgagcac
tggaaaaatgaatgtaaatcagctggaaacccagatataagttacgagatggtttcaaga
tcttcagtagctggttctatattcaaggagatattgtgctgctatgctaagattctgagc
tttgatgacttatgctccaagatgaatgtttcaattctgagagatctgcttgaggcacta
caacccgctggaataccagatgagttcttttctgatatccaaccactaccatcctccgga
agcttggagtatttgtattgtggcgcttatgctttccttgatggagttttgaacttagca
tgctcattctcatttttgctggcaacggaggttctagttactctcaaatcacttgtaagt
tccactcagttattgcttgagaagtcatcggaaggaaatgtcaaaaattgtatagaatct
cttccaagcattattccagttctcagcagaaggcttggaacttgtgcacaaaggcttcta
gcacatgaatgggatgctgaggatctcgagaaagactcaaagagcaaaggagaaacaatt
cagaacatattgcagatttacttggactatagtgactgcacatttgatttagtgaatgaa
cttgcctgcaaaatcataccgcaggtcccttctggcaagagtagaactgggcaggactat
gtttccagcttcccaacacttagccctggtgtgcttgctgtctggtatcgtgtactgcat
gagcaaaatattgcaaatctcaagaagttgataagggaaatcggtacacagcaaaagtcc
agaactattgtaggtggagaagcaatagagagatcattggccaaagcacgccaatctgtt
gacgtaatcgtatcattggtcaatatgtgcaagacgcatgacaaggtattcgtgcatgcc
atggcagtaagatatactgggaggtttgtggattccttcttaaaagtctttgactttcta
aaagtccactttgatgcacacagcgacacaataattcaaatgttcaaggagcttcagaag
gccacaagaaccattcagttcctctgctctgatgccaaggggtcaaagcggacgatgatc
acaagcaagatacctacagtaaagagatcaatggaacgtttcctctttcaagtcaaggct
ctgttccacaatgtgtccaatgggtgctctttctggatgggcaacttgaaacacaaagac
ctcttgggtcaggtggtgagttctcaagtgcatgctgacagggatgatgagaatgaagaa
gggcatgatgaaatggaagatgttcgaggtcaaggtatggctgacaacgtgtctgaagaa
actgaatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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