KEGG   Amborella trichopoda: 18429822
Entry
18429822          CDS       T02990                                 
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic isoform X1
  KO
K06443  lycopene beta-cyclase [EC:5.5.1.19]
Organism
atr  Amborella trichopoda
Pathway
atr00906  Carotenoid biosynthesis
atr01100  Metabolic pathways
atr01110  Biosynthesis of secondary metabolites
Module
atr_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    18429822
Enzymes [BR:atr01000]
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.19  lycopene beta-cyclase
     18429822
SSDB
Motif
Pfam: Lycopene_cycl Pyr_redox_2 Thi4 DAO FAD_binding_3 Trp_halogenase FAD_oxidored NAD_binding_8 FAD_binding_2 Pyr_redox Pyr_redox_3 HI0933_like GIDA XdhC_C Hit1_C
Other DBs
NCBI-GeneID: 18429822
NCBI-ProteinID: XP_006839161
UniProt: W1P458
Position
Unknown
AA seq 502 aa
MDTIISTHRGHQSYPFHYLSEKPIFSSLKSEKPASQAHPKQRKKPFYLDGHVRACSALLE
LVPEIKKENLAFELPKFDPSLKNIVMDLVVVGGGPAGLAVAQLVSEAGLSVCSIDPSPTL
VWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDTNTKFLDRPYGRVNRRQLKSKMMQK
CILNGVKFHQAKVYKVVHEDSQSVLFCNDGVTVHAKVVLDATGFSRCLVQYDKLYNPGYQ
VAYGILAEVEGHPFDVDKMVFMDWRDSHLSGQKELRERNNKIPTFLYAMPFSSNRIFLEE
TSLVARPGLAMEDIKERMVARFKHLGIRVKSIEEDERCVIPMGGPLPVLPQRVVGIGGTA
GMVHPSTGYMVARTLAAAPVVANAIAKYLDSEGGGMGDDLSAKVWKDLWPIERRKQREFF
CFGMDILLKLDLVGTRRFFNAFFDLEPRYWHGFLSSRLFLPELLWFGLSLFSHASNSSRL
EIMAKGTLPLVNMINNLIKDRE
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggataccatcatcagtacacaccgtgggcatcaatcctacccatttcattacctctct
gagaagcccatcttttcttctctcaagtctgagaaaccagcatctcaagcccacccaaaa
caacgcaaaaagccattttacctggatggtcatgtaagagcctgcagtgctcttttagag
cttgttcctgagataaagaaggagaatttagcgtttgagctcccaaaattcgatccatca
ttgaagaacattgtaatggacttagtggttgtggggggtggacctgctggtcttgcagtg
gctcaattggtctccgaggctggcctctctgtgtgctctattgacccatctccaactctt
gtttggccaaataattacggtgtttgggttgatgaattcgaggccatggatctcttagat
tgccttgataccacctggtctggtgcagttgttttcatagatgataccaacacgaaattc
cttgacagaccttatggtagagtcaataggagacaattgaaatccaaaatgatgcaaaaa
tgcattctcaatggtgtgaaatttcaccaagcaaaggtatataaggttgttcatgaagat
tcgcagtcagttttgttttgtaatgatggagttacagtccatgctaaggttgttttggat
gcaacagggttctcaaggtgcctggttcaatatgataagctttataatcctgggtaccaa
gtggcttatgggattttagcagaggtagaagggcacccatttgatgtggataagatggta
ttcatggattggagggattctcatctaagtggacagaaagaattaagagagagaaacaat
aaaattcctacttttctctatgccatgcctttctcatcgaataggattttcttggaggag
acttctttggttgctaggcctggtttggccatggaagatattaaagagaggatggttgct
agatttaagcacttgggaattagagttaagagcatagaagaggatgagagatgtgtaatt
ccaatgggtggtcctttgccagttcttccacaaagagttgtggggataggtggaactgcc
ggtatggttcacccttcaactgggtatatggtggccaggacattagcagctgccccagtt
gtagctaatgcgatagctaagtatcttgattcagaaggaggaggcatgggggacgatttg
tcggcgaaggtttggaaggacttgtggcctatagagagaagaaagcaaagggagttcttt
tgctttggtatggatatcttgctcaagcttgatttagtgggtacaaggagatttttcaat
gcctttttcgatctagagcctcgttattggcatgggtttttatcctcacggttgtttctt
cctgagcttttatggtttggcctttctctgttctcacatgcctctaatagctctaggtta
gagattatggcaaagggaactcttcccttggtcaatatgatcaataacttaataaaggac
agggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (51)   

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