KEGG   Amborella trichopoda: 18431895
Entry
18431895          CDS       T02990                                 
Name
(RefSeq) RNA-dependent RNA polymerase 6
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18431895
Enzymes [BR:atr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     18431895
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     18431895
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 18431895
NCBI-ProteinID: XP_006842072
UniProt: W1P1P2
Position
Unknown
AA seq 1207 aa
MVIDSSEDDKKKLVITQVSIGGFDERTSAKELTEYLERAVGSIMRCRLKRSLTPPNSYPD
YEVDASQVRRTIDVTRVIPHAFVHFAIPKCAKRAETLSGKCALILDSSPLKVHVGMNSSF
RVAWRKTTLPIKFENCKVQIGSLFSWSEFWVGWEGPNLGVDFHVDPYDGTCGVFFTKDIT
FSIKDSNQKVVIKCDMKLEFPIRDIQWVHFFQEQASLGMLVQLSSSPLIYYRTDNDDTHV
TVPFLLLDDEDPWIRTTDFTGNGAVGRCRCYKISFSPRYGLKMEKARDYFRECRILEHGV
LQKVLGPQDYPPKVSTEPGFMKPMRNHFFSVNIQEGLSFEVVYLVTCLVHKGIINQHRLC
KEFFDLLRSQSPEVNTAALRHMYSCHRPVFDAYKELKTVQEWLLKNPRLVKETHIPEDSV
EVRRLMITPTGAQCLPPQVELSNRVLRNYREISDRFIRVTFTDEGLQTLNSGVLSIYTAP
IVKDFSHSKTAQKTAIFRRVRSIAFDGFNLCGRRYLFLAFSSNQLRDRSAWFFADTEKTT
ADSIRSWMGKFTDENVAKCAARMGMCFSSTYATVEFDQKDVNFKLAEIKRNGYVFSDGIG
KITPELATQVASKLKLSENPPCAYQVRYAGCKGVIVTWPRDGKAKLSIRPSMFKFESKHT
MLEVITWTRFQPGYLNRQIITLLSTLKVPNEAFLELQDSMVSDLSQILVNGEVAHKVVTN
SCGEQANTAAIMLSAGFTPQTEPHLREMLSCIRAAQLGDLLAKARIFNPDGRWLMGCLDE
LGELEHGQCFIQVSSPSLENCFIKHGKSFSKRKHNVKVITGTVVVAKNPCLHPGEIRVLE
AVDVPGLHHLVDCLVFPQKGDRPHTNEASGSDLDGDTYFVTWNETLVPPSGKSWAAMDYD
SGEAKFAPRQVSSQDIIEFFMKHMVSDSIGQISNAHVVHADLSKDGALDENCLYLAELAA
IAVDVPKTGKQVFLPNNLKPKMYPDFMEKDGIFSYKSEKILGILYRKIKDAPHIKFKEME
PQSLDDLPYDLDLEVLGSEDFLSEAWHYKCLYDRQIILFLGLYNVSSEGEVVTSCYSSIS
KHNSRKVGELKEKLNNTYRALNKEFKAIFENVGSDVELSDEEKNAFYERKASAWYQVTYH
PKWVKKLEEIRATKGMTEESGRELVTPLSFPWIAVDYLMRIKIKAAKREFDPTKPIDSLA
CYLLPHI
NT seq 3624 nt   +upstreamnt  +downstreamnt
atggtgatagatagcagtgaagatgacaagaagaagctggtcatcacacaagtcagtata
gggggttttgatgagaggacctcagcaaaagagcttactgagtatttagaacgcgcagtt
gggtcaataatgagatgtagactgaagcggtcattgacaccacccaattcctatcctgat
tatgaagtcgatgcttcacaagtcagaagaactattgatgttacaagggtcattccacat
gcattcgtgcattttgcaatacctaagtgtgcaaagagggctgaaactttgtcaggcaaa
tgtgcactaattttggattcatcccctttgaaagttcatgtcgggatgaacagctcattt
cgtgtggcatggagaaagaccactcttcctataaaatttgaaaattgcaaggttcaaatt
gggtctttgtttagttggtccgagttttgggttggttgggaggggcccaatttgggggta
gactttcatgtggatccgtatgatggaacttgtggggtttttttcactaaggacatcact
ttctccatcaaagactcaaaccagaaagttgtgatcaaatgcgatatgaagttggagttc
ccaatccgagatattcagtgggtgcatttttttcaagagcaagcttctttagggatgctt
gtgcagttgagttcatcacctttgatttattacaggacagataacgatgacacccatgtc
actgttcctttccttttgttggatgatgaggacccatggataaggaccactgatttcact
ggtaatggtgcggtgggtcggtgccgttgttataaaatctcattctctcctcgttatgga
cttaaaatggagaaggcgagggactacttcagggagtgtaggatcttggagcacggagtt
ttgcaaaaagtccttggacctcaggattatcctcctaaagtgagcaccgagcctggattc
atgaaaccgatgcgcaatcattttttttcagtaaatattcaggaggggttaagcttcgag
gtggtgtatttggttacttgcttggtacacaagggtattataaatcagcataggttgtgc
aaggaattttttgacttgttgaggagccaatctcctgaagttaacactgcagccctaagg
cacatgtactcttgtcaccgcccagtttttgatgcgtataaggagttgaagactgtccaa
gaatggctcttgaagaatccaaggcttgtgaaggaaacccatattcccgaagatagcgta
gaggtgaggcggttgatgattaccccaactggagctcagtgtcttcctcctcaggtcgag
ctctctaaccgggtccttaggaattacagagaaatatcggaccggtttattagggttaca
ttcacggatgaagggctccaaactctgaattcgggtgttctttctatctacactgctccc
attgtcaaggatttctctcatagcaaaactgcacaaaagacagcaatattcaggagggtg
agaagtattgcttttgatggttttaatctatgtgggcgtaggtatttatttttagcattc
tcatcaaaccaattgagggaccggtcagcgtggttttttgctgatactgagaagacgact
gccgactcaattaggtcgtggatgggtaagttcacggatgagaatgtcgcgaaatgtgcg
gcaaggatgggaatgtgcttttcctcgacttatgccacagttgaatttgatcagaaggat
gtaaactttaagctcgcagagataaaaagaaatggatatgttttctccgatgggataggg
aagatcacaccagagctcgcaacccaagttgcgagcaagttgaagctctctgaaaaccct
ccttgtgcttaccaagtcaggtatgcaggctgcaagggtgtcattgtgacttggcctcgt
gatgggaaggccaaactctcgataagaccaagcatgttcaaattcgaatcaaagcacacc
atgcttgaggttattacttggacccgtttccaacctggatacctaaataggcagataata
accctcctttcaaccttgaaggtgcctaatgaggccttcttggagttgcaagattcaatg
gtgtctgatttgagccaaatactcgtgaatggcgaggtggcacacaaggtagtgactaat
tcttgtggggagcaagccaatacagctgcaattatgttgagtgctggattcacacctcaa
actgaaccccaccttagagagatgctgtcatgcattcgagctgctcagttaggtgactta
cttgcaaaagcaaggatatttaatcctgatggtcggtggttgatgggatgtttggatgag
ttaggcgagctagagcatgggcagtgctttatccaagtctcgagcccttctttggagaat
tgtttcattaaacatggtaagagtttctctaagaggaaacacaatgtgaaggtaatcaca
ggaactgttgttgttgccaagaacccttgcctccaccctggggaaattcgggttctcgaa
gcagttgatgtgcctgggttgcaccatttagttgattgtttggttttccctcaaaagggg
gatcgaccgcataccaacgaggcatcaggaagtgatctagatggagatacttactttgtc
acgtggaacgaaacgctcgtgcctccaagtggcaagagttgggctgcgatggactatgat
tctggcgaagccaaatttgccccacggcaagtgtcgtctcaggatataatcgaattcttc
atgaagcatatggtgagtgatagcattgggcagataagcaacgctcatgtggtgcatgca
gacctaagtaaggacggggcgctagacgagaattgcctttacttggcagagctagcagca
atagccgtagatgttcccaaaaccggtaagcaagtcttcttgcccaataaccttaaaccc
aagatgtaccctgacttcatggagaaggatggaattttctcttacaaatcggagaaaatc
cttgggatcctctatcgaaagataaaggacgctcctcacataaagttcaaagaaatggag
cctcagtcccttgatgacctcccctatgacttggacctcgaggtgctgggctctgaggac
tttctgtcggaggcttggcattataaatgcctatatgatagacagatcattcttttcctt
gggctgtataatgtgagctctgagggtgaggtggttacgagttgttattcctcaatttct
aaacataacagtcggaaggtgggtgaattgaaagagaagctgaataacacgtatagggct
ttgaataaggagttcaaagccatctttgagaatgttggttcagacgtcgagctgagtgat
gaggagaagaatgctttttatgaaaggaaggcttcagcttggtatcaagtgacctaccac
cctaagtgggttaaaaagcttgaggagattagagcaacgaagggcatgacggaggagtca
ggcagggaattggtcaccccattgagctttccatggattgctgtcgattatttgatgagg
ataaagattaaggcagctaagagggagtttgatccaacaaaacccattgactctcttgcc
tgttatttgctcccacacatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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