KEGG   Amborella trichopoda: 18432220Help
Entry
18432220          CDS       T02990                                 

Definition
(RefSeq) probable methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
atr  Amborella trichopoda
Pathway
atr00450  Selenocompound metabolism
atr00970  Aminoacyl-tRNA biosynthesis
atr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    18432220
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    18432220
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:atr01007]
    18432220
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:atr03016]
    18432220
Enzymes [BR:atr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     18432220
Amino acid related enzymes [BR:atr01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   18432220
Transfer RNA biogenesis [BR:atr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    18432220
 Prokaryotic type
   Other AARSs
    18432220
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA_bind tRNA-synt_1 Anticodon_1
Motif
Other DBs
NCBI-GeneID: 18432220
NCBI-ProteinID: XP_006842391
UniProt: W1P8Y8
Position
Unknown
AA seq 801 aa AA seqDB search
MGDATGNGGPKLPIPGMRNIMITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRGYNTI
YMCGTDEYGTATETKALEENCTPQEICDKYYAIHNEIYEWFDISFDKFGRTSCPDNTEIS
HAIFHKLLENNWLSENTMQQLYCDTCQRFLADRLVEGACPTPGCGYEDARGDQCEKCGKL
LNPNELIDPRCKVCRSSPRSRDTNHLFLELPLLKDKLEEYVKTTSVAGSWSQNAIQTTNS
WLKEGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYVAITSSYTSEWAKWWKDPE
NVELFQFMGKDNVPFHTVMFPSMLFGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFG
NDAKDTKIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKLNNELLKNLGNFIHRVLSFIAKP
EGEGYGSVIPDAPNADSHLLTKKLAETVGNLVEQFVEAMEKVKLKQGLKIAMSVSSEGNA
YLQDNQFWKLHKTDPTSCATVMKTSVGLVHLLASLLEPFMPSFSRKVVAQLNLPCESLSI
CKQKGDAARERRPWDIVPAGHKIGKPEPLFFEMKDDEVNDYRERFAGSQSDRAVKAEAEA
QKIAEHLKKTTVSDGTTKKKGQSKLPAAEKEKLKEVEISVARLDIRVGLVTKVQKHPDAD
SLYVEEIDVGEESPRTVVSGLVKYIPLEKMQNRKVCVLCNLKPATMRGIKSQAMVLAAST
EDHTIVELVDPPENARVGERVTFPGFSGEPDEVLNPKKKVWETVQVDLRTTEDLVASYKG
VPFTTSGGVCKVSSIACGSIR
NT seq 2406 nt NT seq  +upstreamnt  +downstreamnt
atgggtgatgctactggtaatggtggacctaagcttccgattcctggcatgagaaatatt
atgattacaagcgcccttccatatgttaacaacgttccccatctcggcaacataattggc
tgtgtattgagcgctgatgtttttgctcggtattcccgtcttcgtgggtacaacacgata
tacatgtgtggaactgatgagtacggaacagctactgagaccaaggcccttgaagagaat
tgcactcctcaggagatttgtgacaagtattatgcaatccacaatgagatctatgaatgg
tttgatataagctttgacaagtttggacgtacatcttgtcctgataacactgaaattagc
catgcgatattccacaaactgttggagaataattggctttccgaaaacacaatgcaacag
ctctattgtgatacatgccagcgatttctggctgacagacttgtggaaggagcatgccct
actcctggatgtggttatgaagatgctcgtggtgatcagtgtgaaaaatgtgggaagttg
ttaaatccgaacgaactgatagatcccagatgcaaggtctgccgcagctcccctcgcagt
cgcgatactaaccatttatttctagaacttccattactgaaagataagttagaagagtat
gtcaagactacatcagtggctggatcttggagccaaaacgcaatccagactacgaattct
tggctaaaggaaggattgaagccccgttgcatcacgagagatctgaaatggggtgttcct
gtccctcatgaaaaattcaaagacaaggttttctatgtgtggtttgatgcaccaatcgga
tatgtggcaataacttcaagctatacatcagagtgggctaaatggtggaaggatcctgaa
aatgttgagttgtttcagtttatgggcaaggataatgttccatttcatacggttatgttt
ccttcaatgctttttggaactggcgagaactggacactgatgaagacaattagtgttaca
gaatatttaaactatgaagcgggaaaattctccaaaagcaagggtgtgggagtttttggt
aatgatgccaaagatacaaaaatacctgttgaagtttggagatattatctgctcacaaac
aggcctgaggtgtcagacactttatttacgtggacagacttgcaagccaaactgaacaac
gaattgttgaaaaaccttggaaattttattcatcgcgtcctcagctttattgccaaacct
gaaggagaaggctatggttctgtcattcctgatgcaccaaatgcagattcacatctactt
actaaaaagttagctgagactgtgggtaaccttgttgagcagtttgtcgaagcaatggag
aaggtcaagctcaaacaaggtttgaaaattgcaatgagcgtctctagtgaggggaatgca
tatctacaagacaaccaattctggaagctccacaaaacagaccctacttcttgtgccact
gtaatgaagacttctgttgggcttgtgcatcttcttgcttctcttcttgaacctttcatg
ccttctttctctcgtaaggttgttgcacagcttaatttgccttgtgaaagcctttccatt
tgcaaacaaaaaggagatgctgcaagggaaaggagaccttgggatatagtacctgcaggg
cataaaatagggaagccagagcctctattctttgagatgaaagatgatgaagtaaacgac
tacagagagaggtttgctggaagccagtctgatagggctgtaaaggcagaagctgaagca
cagaagatcgctgagcatcttaagaaaactacagtttcagatggaaccactaagaaaaag
ggccaatccaagttgcctgcagcagaaaaagagaaactgaaggaggtagagatttcagtt
gcaagacttgatatccgtgtgggtctcgtaaccaaagtccagaagcatccagatgctgat
tccttatatgtggaagagatcgatgtgggtgaagaatctcctcgaactgttgtcagtggc
cttgtcaagtacattcctcttgagaagatgcagaatcggaaagtttgtgtcctttgtaac
ctgaaaccagcaaccatgcgggggataaaatcacaagcaatggttcttgctgcctccact
gaagatcacactattgtcgagttggttgatccaccagagaacgcacgagttggagagagg
gttacattcccagggttttcaggtgagcctgatgaagtgctgaatccaaagaagaaggtc
tgggaaaccgttcaagttgacttacggacaactgaagatcttgtggcttcgtacaaaggt
gttcctttcacaacatcaggtggtgtatgcaaagtttcttcaattgcttgtggatcaatt
aggtag

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