KEGG   Amborella trichopoda: 18435397
Entry
18435397          CDS       T02990                                 
Name
(RefSeq) WD repeat-containing protein 43 isoform X3
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
atr  Amborella trichopoda
Pathway
atr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    18435397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atr03009]
    18435397
Ribosome biogenesis [BR:atr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    18435397
SSDB
Motif
Pfam: Utp12 ANAPC4_WD40 WD40 PQQ PQQ_2 RMC1_N Lactonase
Other DBs
NCBI-GeneID: 18435397
NCBI-ProteinID: XP_006845505
UniProt: W1PJC5
Position
Unknown
AA seq 593 aa
MGRKTASKPPGLCSFSEQGKFFAIADANGSVKIWDTRNGNLQVEWKDSNGEELSYCTCMK
WVFTKKKSQRRRLPDILSLGTRGGDVLTIDVATGKLKWKSTACHSGGVTALSFANESRAL
HSAGVDGMVCELDCKSGELLGKFKASKGSIASMSVSPNGKLLAVASKKIHLFNLENQTEV
HKFRGGDVQHLGFSEDGHSFLSSSFGDERIQVWKYDVENKTRSPAASLSMQGLPLIVEIS
NAGQDRGGLRVLSVSEKGVAYVWHGHNVSQGEFAPTMIDINSFQRKGDAEIEGMDHVFAA
KLLDPESNCHLAVCVAYGDSAKPQFRVCEVTDSQKMEEVNETLDVPNLKKKSSKKRTASD
FNSTENVDMGGLELSNEDAVQCNMNEPTMEERLASLDVHEDAKLNDHTEQLDSSNPVLPA
ADSVSVLLRQALHADDRALLLECLNTPDEKVIGNTVSMLNPSEVLKLFNSILPMFDSRGT
IIVCIIRWIRCLLLKRSSCILSQDCSVYVLNSLYQLIESRISTFKSGLQLLGTLDLLSLE
IPGEDAEAPAIIPAIYEDKDDSDGELTDAMETSKEEEVMTTRVYEESDDNIED
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgggcaggaaaaccgcctccaaaccacctggcctttgttctttcagtgaacagggaaag
ttctttgccattgcagacgcaaatggctctgtcaaaatatgggacacacgtaatggaaat
cttcaagtggaatggaaagactccaatggcgaagaacttagttattgcacttgtatgaaa
tgggttttcactaaaaagaagtcgcagagaagacgtttaccagacatactttcccttggc
acacgtggcggtgatgttctgaccattgatgtggccactggcaagctgaaatggaaatcc
actgcatgtcactcaggaggtgtaactgcgctttcctttgcaaatgaaagtcgtgccttg
catagcgctggtgttgatggaatggtgtgtgagttggattgtaaatcaggagaactttta
ggcaaatttaaagcttcaaaagggtctattgcttccatgtctgtttccccaaatggaaag
cttttagctgtggccagtaaaaagatacacctgttcaatctggagaatcaaactgaagtt
cacaagttccgtggtggcgatgtccagcatttgggtttttcagaagatgggcatagtttt
ttgtcatcgtcatttggtgatgagcggattcaagtatggaagtatgatgttgaaaacaaa
actagatcacctgctgcttctctatccatgcaagggctgccactaatagtggaaataagc
aatgcaggtcaggatagaggggggcttagagttctttcggtttcggagaaaggtgttgcg
tatgtgtggcatggccataatgtttctcaaggggaatttgcccccacaatgattgacata
aactcattccaaagaaaaggcgatgcagagatagaggggatggatcatgtttttgctgcc
aagttacttgatccagaaagcaattgccatttggcagtttgtgttgcttatggtgactca
gccaagccgcaatttcgtgtttgtgaggtgactgattctcaaaagatggaagaggtcaat
gaaacattggatgttccaaacctcaagaagaaatcaagtaagaagcgaacagcatctgac
ttcaacagtacagaaaatgttgatatgggtggcttggagttatctaatgaagatgctgtt
caatgtaatatgaatgagccaactatggaggaaagacttgcgagtttggatgtacatgag
gatgcgaagttgaacgaccatacagaacaattggactcttccaatccggtgcttccggct
gcagattcagttagtgttctacttaggcaagcgctgcacgctgatgatcgtgctttgtta
ttagaatgcttgaatacaccggatgaaaaggttatagggaacacagtttctatgttgaat
ccatcagaagtcctcaagcttttcaatagcatcttacctatgtttgattcacggggtacg
ataattgtctgcatcattcgatggattcgatgtttgcttcttaaacgatcaagctgcata
ctgtctcaagattgctcagtatatgttctcaattcactttaccagctcatagagtcgagg
atatctaccttcaaatcaggacttcaactattaggcaccttggaccttctgtctttagag
attcctggtgaagacgctgaagctccggcaattattcctgcaatttacgaggataaggat
gacagtgatggtgagttgactgatgcaatggaaactagtaaagaagaggaagtgatgaca
actcgtgtttatgaagaaagtgatgataatattgaagattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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