KEGG   Amborella trichopoda: 18437261
Entry
18437261          CDS       T02990                                 
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
atr  Amborella trichopoda
Pathway
atr00300  Lysine biosynthesis
atr00470  D-Amino acid metabolism
atr01100  Metabolic pathways
atr01110  Biosynthesis of secondary metabolites
atr01230  Biosynthesis of amino acids
Module
atr_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:atr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    18437261
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    18437261
Enzymes [BR:atr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     18437261
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-GeneID: 18437261
NCBI-ProteinID: XP_006847540
UniProt: W1PN30
Position
Unknown
AA seq 486 aa
MAASHLSHSAPHSLSFSKPLQNPTKLTFYSHFSLPKAQRRRLSLQAVLSENLPKVSSPIK
TRNRKFHHCFSKSEDGFLYCEKLKVQEIMEAVEKRPFYLYSKDQITRNFEAYMNALEGLD
YIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELKLALHAGFDPTKCVFNGNGKLLEDLV
LAAEKGVFVNVDSEFDLENIVTAARIAGKRVPVLLRINPDVDPQVHPYVATGNKNSKFGI
RNEKLQWFLDAAKSHPNELKLVGAHCHLGSTITKVDIFRDAALLMVNYIDEIRAQGFEIS
YLNIGGGLGIDYHHTGAVLPTPMDLINTVRELVLSRGLNLIIEPGRSLIANTCCLVNRIT
GVKTNGTKNFIVIDGSMAELIRPSLYGAYQHIELVSPPAPDTEVSTFDVVGPVCESADFL
GKDRELPTPSKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDGSIVKIRHEETFEDHL
RFYEGL
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggcagcctctcacctctctcattctgctccccactctctctctttctctaagcccctg
caaaatccgacaaagctaacgttctactcccatttctcactcccgaaagcccaacgaaga
cgcctctctcttcaagctgtcttatcagagaatcttcccaaagtgtcttcacctataaag
accagaaaccgtaagttccaccattgcttcagcaaatctgaagatgggtttttgtactgt
gagaaactaaaggtccaagaaataatggaggccgtcgagaagaggcctttctatctctat
agcaaggatcagattaccaggaactttgaagcttacatgaatgctcttgaagggcttgat
tacattataggctatgcgattaaggcgaacaataatttgaagattttggagcatcttaga
ggattgggttgtggtgctgttcttgttagtgggaatgagttgaaattggctcttcatgct
gggtttgatccaactaagtgtgtattcaacgggaatggaaaactcttagaagacttggtt
ttggcagctgagaaaggcgtttttgtgaatgttgatagtgaattcgacttggaaaacatt
gtaactgccgcaagaattgcagggaaaagggtcccagttttgcttcgtatcaaccctgat
gtggatcctcaggtccatccctatgttgctactggaaacaaaaattccaaatttggtatt
agaaatgagaagctccaatggtttttagatgctgcgaagtcgcatcccaatgagctgaag
ctggtgggggcccattgccatcttggatcaacaattactaaggtggacattttcagggat
gctgcgcttcttatggtgaattacattgatgaaattcgggctcagggctttgaaattagt
tacttgaacattggaggtggtttgggaattgattaccatcatacaggtgctgtccttcca
actcctatggatctcatcaacactgtacgagagctggtcctttcccgaggtcttaatctt
attatcgagcctggaagatctctcattgcaaatacctgctgtctggtcaaccggatcact
ggtgttaaaacaaatggaaccaaaaatttcattgtgatagacggaagcatggcagaactt
atcaggcctagtctctatggggcttatcaacacatagagcttgtttctcctccagcacct
gatactgaagtttctacctttgacgtggttgggcccgtctgcgaatctgcagatttcttg
ggaaaagatcgagaattgccgaccccttcgaagggtgctggccttgtcgttcatgatgcc
ggggcatattgcatgagcatggcatcgacatataatttgaaaatgcgacctcctgaatat
tgggtggaggatggatccattgttaaaataaggcatgaggagacatttgaagatcatctc
aggttttatgaaggcttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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