KEGG   Amborella trichopoda: 18437982
Entry
18437982          CDS       T02990                                 
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18437982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18437982
Spliceosome [BR:atr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    18437982
 Complex B
    18437982
 Complex C
   U2 SnRNP specific factors
    18437982
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 18437982
NCBI-ProteinID: XP_011624778
Position
Unknown
AA seq 611 aa
MTVEERVVVANGGRDNKIVTNGGGDNKIINNASVASATTSTTENGGGITMNSYIKKSLKE
ADRRRRRRKQKKNKTHNNNADTAATRDVDDDDNDHGDVKTTIHHEGQERVEVEYVPEKTE
LDEDLLDDFKKVFEKFSFGEAALGDKDDDKKDEAGLDAAAAAAKKQADSDEDEDEQDGQQ
KEKGVSNKKKKLQRRMKIAELKQICSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHW
CQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKM
DIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGILSQELKEALGMPEGAP
PPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGV
QQQEQPNYEEEPVDRSKHWGDLEEEEEEEEEEEEQMEEEELEAGIQSVDSLSSTPTGVET
PDVIDLRKQQRKEPEKPLYQVLEEKEERIAQGTLLGTTHTYVLGATDKTGAKRVELLRGQ
KSDKVDVTLRPEDLEALDDVTLAAKYEEAREEEKLRNQREDFSDMVAEAEKKRKRKMQEK
EGKAKKKDFKF
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgacagtggaagaacgagtagtggtggctaatggaggacgagacaacaaaatcgtgact
aatggaggaggagacaacaaaatcatcaacaacgctagtgttgcatctgctactacttct
actactgagaatggaggaggaataaccatgaacagttacattaagaaatctctgaaggag
gctgatcgacggaggaggaggaggaagcaaaagaaaaacaagactcataataacaatgct
gatacggctgctacaagggatgttgatgatgatgataatgatcacggtgatgtaaaaaca
actatccatcatgagggtcaggagcgagttgaagtggagtatgttccagaaaagacagag
ttggatgaagatctcttagatgattttaaaaaggtctttgagaagtttagctttggggaa
gctgcacttggtgacaaggatgatgataagaaggatgaagcaggtctagatgcagcagcg
gcagcagcaaagaagcaagctgactctgatgaggatgaggatgagcaagatggccaacaa
aaagaaaaaggcgtctctaacaaaaagaaaaagttgcaaaggaggatgaagattgcggaa
ctgaaacaaatatgctcgaggcctgatgtggttgaggtttgggatgcaactgcagcagat
cccaagttacttgtattcttgaaatcgtaccgaaatacagtacctgttccaagacattgg
tgccagaaacgaaaattcctacagggaaagcgtggcattgaaaaacagccttttcaactt
ccagattttattgcggcaactggtattgagaaaataagacaggcatatattgaaaaggag
gatagtaagaagttgaaacagaagcaaagggaacgtatgcaaccaaagatgggaaagatg
gatattgattatcaggtcctccatgatgcattctttaaatatcaaacaaaaccgaaattg
actactcatggtgatctttatcatgaagggaaggaatttgaggtcaagctcagggagatg
aaacctggcattctctctcaggagctaaaggaagctcttggtatgcctgaaggtgcacca
cctccttggctcatcaatatgcagagatatggtcctccgccatcttatccgcatctgaaa
attcctggtttgaatgctcctattccacctggagctagctttggttatcatcctggaggt
tggggcaagcctcctgttgatgaatttggacgcccgctatatggagatgtttttggtgtc
caacagcaagaacagcctaattatgaggaggaacctgttgataggagtaagcattggggc
gacttggaggaagaggaggaggaagaagaagaggaggaggaacagatggaagaagaagaa
ttggaggctggtattcaatcagttgacagcctctccagtacgccaactggtgtggagaca
cctgatgtcattgatcttcgaaagcaacagaggaaagagccagagaagcctctttatcaa
gtacttgaagagaaggaagaaaggattgcacaaggaaccttactcggaacaacgcacacg
tatgtgcttggggcaacagataaaactggtgctaaaagggttgagctactgcgagggcaa
aagtcggacaaagtggatgtcactcttaggccggaagatttagaggctttggatgatgtt
actctggcagcaaagtatgaggaagcaagggaagaggagaagctgcggaatcaacgagag
gacttcagtgacatggtggcagaggctgagaaaaagaggaagcgcaagatgcaggaaaag
gaagggaaggcaaagaagaaggatttcaagttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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