KEGG   Amborella trichopoda: 18438308
Entry
18438308          CDS       T02990                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
atr  Amborella trichopoda
Pathway
atr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18438308
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atr01009]
    18438308
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18438308
   03036 Chromosome and associated proteins [BR:atr03036]
    18438308
Protein phosphatases and associated proteins [BR:atr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     18438308
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     18438308
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     18438308
SSDB
Motif
Pfam: WD40 ComGF Inh
Other DBs
NCBI-GeneID: 18438308
NCBI-ProteinID: XP_006848557
UniProt: W1PQ04
Position
Unknown
AA seq 522 aa
MIPVGEEVGVPPSLEWRFSQVFGERAAGEEVQEVDIISAIEFDKTGEHLATGDRGGRVVL
FERADGRDRTCRKELERLDHPITKHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVQWCE
MANGTLFLLSTNDKTIKYWKVQEKKVKKICEMNLESAPVRNGYVAGTAGALNPKICAANG
GSPQRHHNYPDFVFPPGGIPSLHLPVVVSHEKNVVPRCRRVYAHAHDYHINSISNNSDGE
TFISADDLRINLWNLEISDQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGT
IRLIDLRQSALCDTHAKLFEEQEAPGSRSFFTDIIASISDIKFAKDGRYILSRDYMTLKL
WDLNMETGPISTFQVHEYLRPKLCDLYDNDSMFDKFECCLSGDGLRVATGSYSNLFHVFG
CAAGSHEAMTLEASKNPTRRQVQTPSRPSRSFGNSTRGRRRGLESDANGGAFDFTTKLLH
LAWHPTANSIACAAANSLYMYHADDPSKQASPPHVLEPDTTT
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgataccagttggagaagaagttggtgttcccccttctctggaatggagattctctcag
gtatttggggaacgtgcagcaggagaggaagttcaggaagtggatattatctcggcaatt
gaatttgataaaacgggtgagcatcttgcaactggagatcgtgggggtcgtgtggttcta
tttgaaagggcagatggaagagatcgtacatgtaggaaggagctcgagagattggatcat
cccatcacaaaacatcctgaatttcgctacaagacggagtttcaaagccatgagcctgag
tttgattatctcaagagcttggaaatagaggagaaaattaacaaggtgcagtggtgtgaa
atggcaaatgggacccttttccttctgtccacaaatgacaagacaataaaatattggaag
gttcaagaaaagaaggtaaagaagatttgtgagatgaatttggaatcagcacccgtaaga
aatggatacgtagctggcacggctggagcattgaacccaaaaatatgtgcagccaatggt
ggatctccacaaaggcaccataattatcctgactttgtgtttcctccaggaggaatccca
tcacttcatctaccggtggtagttagccatgaaaagaacgttgtaccgaggtgtcggcga
gtatatgctcatgctcatgactatcacatcaactccatttcaaataacagtgatggggag
acatttatatcagcagatgatctgagaataaatttatggaacttggaaataagtgatcaa
agtttcaatatcgtagatgtgaagcctgcaaacatggaggacctcaccgaggtgataaca
tctgcggagttccatcctactcactgtaatacactcgcatacagtagttcaaagggcaca
attcgacttattgacttacggcaatcagctctttgtgatactcatgcaaaactatttgag
gagcaggaagcaccagggtcaaggtcatttttcaccgacataattgcttcaatatcagat
attaagtttgcaaaagatggaagatatattctgagtcgtgattacatgacacttaagtta
tgggatttaaacatggaaactgggccgatttcaactttccaggtccatgagtatctacga
cctaagctctgtgatttgtatgacaatgattcgatgtttgacaaatttgagtgctgtcta
agtggtgatggccttcgggttgcaacgggttcttatagcaacctgttccatgtctttggt
tgtgctgctggcagccatgaagcaatgactttggaggccagcaagaatcctacaagacga
caagttcagacaccttctaggccttcaagatcctttgggaattcaacacgtggtcgcaga
agaggactggaaagtgatgccaatggtggggcatttgacttcacaacaaagctgcttcac
ctagcatggcaccctactgccaactcgattgcctgtgctgctgcaaatagcctgtacatg
taccatgcggatgacccatcaaaacaagcctcaccccctcatgttcttgaacctgataca
acgacatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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