KEGG   Amborella trichopoda: 18440043
Entry
18440043          CDS       T02990                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70 isoform X1
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
atr  Amborella trichopoda
Pathway
atr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    18440043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18440043
   03400 DNA repair and recombination proteins [BR:atr03400]
    18440043
Spliceosome [BR:atr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    18440043
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     18440043
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP HeH SAP_new25
Other DBs
NCBI-GeneID: 18440043
NCBI-ProteinID: XP_006850259
UniProt: W1PWT5
Position
Unknown
AA seq 625 aa
MDYDPDNLFRDDEEDPEGEFFQERESSKEFVVYLIDARPEMLAQDAGKSESHFHAANRCI
TESLKTLIINRDYDEVAICFFNTKEKKNMQDLDSVYVFNVPEREELDRPTARLIKEFSHI
EEKFLTKIGSRNGIIPMTRENSLYNAIWVSQGLLRRGSSKNVDKRILLFTNEDDPFRHVD
GATKSDMIRTTLQRAKDVQDLSISIELFPMCRPGTEFNTYKFYAELLGLEGEELSEFLPL
AAEKIEDMVDQLKKRIFKKRVIRRMAFLIHDDMWIELNSYALIRPTSPGVITWLDSVSNT
QLKSERSFICADTGTLLQEPMERFHLHKNEIVRFSLEELSEVKRISSVPLFLLGFKPTDC
LKDYHNLKPSTFLYPSDEEIDGSTCIFVALYRAMLKYQRFALAFFGSSTHPQLVALVAQD
DMIRNGVQLEPPGMHMIYLPYCNDIRSIEELQNHDSDTIPRATDDQIEKAMAVMKKLDLK
EFSISQFANPALQRHYALLQVLALGDDVDELPEINDETLPDEEGMRRPGVVNALEGFKAA
VYGENHDAEEAALEATKSGGEASKKRKAETAVKEAANYNWDDLAESGKLKDLTMPELKNY
LAAHNLPVTGKKDALISRILTHLGK
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggattatgacccagacaacctttttcgagatgatgaggaagaccctgagggcgaattt
tttcaggaaagggaatcaagcaaggaatttgttgtatacctcatagatgctagaccagaa
atgcttgctcaggatgctgggaagagtgaaagccattttcatgctgctaacaggtgcatt
acagagtccttgaagaccctaatcattaaccgggattatgacgaggttgctatttgcttc
tttaatacaaaggaaaagaaaaatatgcaagacttggatagcgtctatgttttcaatgtt
cctgaaagagaagaacttgataggccaacggcaaggctgataaaagaattcagtcatata
gaagagaagttccttacaaaaattggaagtcgcaatggaattattcccatgaccagagag
aattcgctctacaacgcaatttgggtttcacaaggccttttgcgcagaggatcttccaag
aatgttgataagcgaatacttctatttacgaatgaagatgatccttttcgacatgtggat
ggggccaccaaatctgatatgataaggacaacacttcaacgggcaaaagatgtgcaagac
ctaagcatctcaattgagcttttccccatgtgtaggccagggacagaattcaatacatat
aaattttacgccgaactgctgggtttggaaggtgaagagctatcagaattcttgccattg
gcagcagaaaaaattgaagacatggtggatcagttgaagaaaagaatttttaaaaagcgt
gtaatccggaggatggccttcttgatacacgatgacatgtggattgaattgaattcttat
gctttgattcgtccaacaagtcctggggtaattacttggcttgattctgtaagcaataca
cagttaaagtcagaaaggtcctttatatgtgcggacactgggactttgcttcaggaacca
atggaacgttttcatttacataaaaatgagattgtaaggttctcccttgaggaactgtct
gaagtaaaaagaatttcttcagttccactgtttcttttaggattcaagcctacggactgc
ttgaaagattatcataatttgaagccctcaacatttctctatcctagtgatgaggaaata
gatggaagcacttgcattttcgttgctctttatagagctatgctgaaatatcaaagattt
gctttggctttctttggtagctcaactcatccccagctggttgctcttgttgcccaagat
gacatgatcaggaacggtgttcaacttgagcccccggggatgcatatgatctaccttcct
tactgtaatgacatccggagcatagaagagcttcaaaatcatgatagtgatactattcct
agagcaacggatgatcaaattgaaaaagcaatggctgtgatgaaaaagctggacttgaaa
gaattttcaatttctcaatttgcaaatcctgccttgcagagacattatgcattactgcag
gtcttggctctaggggatgatgttgatgagttgcctgagatcaatgatgagacgttacct
gatgaagaaggcatgagaagacctggggttgttaatgcattggaaggcttcaaggctgca
gtttatggtgagaaccatgacgctgaggaggctgcattggaagctaccaaatcaggtggc
gaggcatctaaaaaacgaaaggctgaaacagctgttaaggaagcagcaaattataactgg
gatgaccttgcagaaagtggaaagctcaaggatttaactatgccagagttgaaaaattat
ttggcagcacacaacctcccagttactggtaagaaggatgcactgattagccggatcttg
acacatttaggaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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