KEGG   Amborella trichopoda: 18443681
Entry
18443681          CDS       T02990                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
atr  Amborella trichopoda
Pathway
atr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    18443681
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:atr01007]
    18443681
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:atr03016]
    18443681
Enzymes [BR:atr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     18443681
Amino acid related enzymes [BR:atr01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   18443681
Transfer RNA biogenesis [BR:atr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    18443681
 Prokaryotic type
    18443681
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 tRNA-synt_2d EAD7
Other DBs
NCBI-GeneID: 18443681
NCBI-ProteinID: XP_006853925
UniProt: U5D1W4
Position
Unknown
AA seq 597 aa
MPTVSIGRDCLFEELGRTYTQEEFEELCFDFGIELDDVTTEKAIIRKEKHLKEEEGADGD
EEVIYKIEVPANRYDLLCLEGLAQALRIFVGSQQTPTYTLADVPVSSMHKIYIRPETARI
RPYIVCAVLRGITFDEARYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP
PTEINFVPLKQVKNFRADELMDFYKSDMKLKKFLHIIESSPVYPIIYDANRTVLSLPPII
NGAHSAISLKTKNVFIECTATDLTKAKIVLNTMVTMFSMYCERIFEVEPVEVVGPDGKSS
MCPDLSVFEMKVPLSYITSSIGVSLEANEVVGLLNRMQLQSDKSKSNDGSWVIHLSVPPT
RSDILHACDVMEDVAIAYGYNKIPKTKPTSLTLGQQQPLNQVTDLLRLEVAMAGFSEVLT
WILCSHKENFLMLNRKDDSKMAVVIGNPRSSDFEVVRTSLMPGILKTVGHNKDHPRPIKI
FEVGDVVFLDGEKDVGAANRRQLAALYCNANSGFEVIHGLVDRIMEVLGIPFVPVGDDTG
YYIKPSHEPEFFPGRQAVILYRGKQIGRFGIVHPEVLANFDIPDPCSLVELNIEALL
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgcctacagttagcattggcagggattgcctctttgaagaactaggaagaacttacact
caggaggaatttgaggagctttgcttcgactttggaattgaactcgatgatgtaacaact
gagaaagcgattattaggaaagaaaagcatttgaaagaggaagaaggagctgatggcgat
gaagaagttatttacaagattgaggtgcccgctaatagatatgacctgctgtgccttgaa
gggcttgcacaagcccttcggatttttgttggaagtcaacagacaccaacatatactttg
gctgacgttccagttagttccatgcataaaatttacatacggcctgagactgcacgcatt
cgcccctacattgtttgtgctgttctaagagggatcactttcgatgaagctagatataat
agcttcattgatctccaagataggctccatcaaaatatttgcaggaggagaactctggtt
gctatagggacccatgatttggatactctacaaggtcctttcacatatgaggctttgcca
cctacagagatcaattttgtgccattgaagcaggtgaagaatttcagagcagatgaactc
atggacttttacaagtcggatatgaaactgaagaagtttctacatataattgagagttcc
cctgtatatcctatcatatatgatgcgaacaggacggtgctgtccttacctcctatcatt
aatggggcacattctgctattagtttgaaaacaaagaatgtcttcattgagtgcactgca
actgacctgacgaaagccaaaattgttttaaacacaatggtaaccatgttttcaatgtac
tgtgaacgaatatttgaggttgaaccagttgaggtggtgggtcctgatggaaaatcgagc
atgtgtcctgatttgtcagtgtttgaaatgaaggttcccctttcttatatcactagctca
attggtgtttcactggaagcaaatgaggttgtaggtctactgaacagaatgcaactgcaa
tctgataaatcaaaatcaaatgatgggtcttgggttatccatttgtctgtaccaccaacc
cgaagtgatattcttcacgcttgtgatgtgatggaggatgttgcaattgcttatgggtac
aacaaaatcccaaaaacgaagccaacctcattgaccctagggcagcagcaaccgttgaat
caggtcactgatctcttaagattggaggttgcaatggctggattttcagaggtgctaaca
tggattttatgttctcacaaagaaaacttcttgatgttgaaccgtaaggatgattcaaaa
atggcagttgtcattggaaatcctcgttcttcagattttgaggttgttcgaacaagtctc
atgcctggcatcttgaaaacagtgggtcacaataaagatcatccaaggcctattaagata
tttgaagtaggtgatgttgtgttcttagatggtgaaaaagatgttggtgcagctaatcgt
cgccaacttgctgcattatactgcaatgctaattctgggtttgaggttatccatggtttg
gtggataggataatggaagtactagggataccttttgttccagttggagatgatacggga
tattacatcaaaccttctcatgagccagagttttttccagggagacaagctgtaatcctt
tatagaggaaagcaaattggccgctttggtattgtacatccagaggttttggccaacttt
gacatcccagacccatgttctctggtcgagcttaacatcgaggcattactgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

Download RDF
DBGET integrated database retrieval system