KEGG T02990: 18444106

Amborella trichopoda: 18444106

Entry

18444106          CDS       T02990

Name

(RefSeq) CLIP-associated protein isoform X1

K16578

CLIP-associating protein 1/2

Organism

atr Amborella trichopoda

Brite

KEGG Orthology (KO) [BR:atr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18444106
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:atr04812]
    18444106
Chromosome and associated proteins [BR:atr03036]
Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     18444106
Cytoskeleton proteins [BR:atr04812]
Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      18444106

SSDB

Motif

Other DBs

NCBI-GeneID:

18444106

NCBI-ProteinID:

XP_006854346

UniProt:

U5D627

Position

Unknown

AA seq 1463 aa
MEEALEMAQAKDTKERMAGVELLQQHLENCRKPLPAAQVTQLVDCCMDLLKDNNFRVSQG
ALQALTSAAVLSGEHLKLHFNALLPAAVERLGDAKQPVRDAARRLLIALMQVSSPTIIVE
RAGSYGWTHKSWRVREEFARTVSSAIHLFAATELPFQRVLLAPVLQLLNDSNNTVREAAA
SCIEEMYMQVGPQFRDELQRHHLPSSMVKEINARLEKLEPKVRASDGRTTQFGSAEMKPA
VVPTFSQKKSSPKTKSVARETSVFGGESDVAERPMDPVKVYSEKELVREFEKIASTLVPE
QDWSVRIAAMQRVEGLVFGGATDYPSFTTLLKQLVGPLSIQLSDRRSSIVKQACHLLCLL
SKELLGDFEACAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADFAKH
DRSAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRSTARTCYRMF
TKTWPERSRRLFLSFDPVIQRIINEEDGGIHRRYASPSLRERGVQQLRVPSQPPALSNLP
GYGTSAIVAMDRSASIAASGPSLSSGSALVSQMKPQGKGTERSLESVLQASKQQVSAIES
MLRGLDISEKQNSLSTSCPSSLDLGVDPPSARDPPLPAAVPASNHLTHGSGFSNSAGANI
AKGSIRNGTPGLTDLTSQLPASKEHNKLSYLSNLASDPLSTLSYTAKRVPISSERSLEIS
TFEDNVDIRPTRRISKSDMYTDRHFLETSYRDVGSRDSQNHHIPNFQRPLLRKHVAGRAS
ASGRASFDDGQFPIGEMSHYTDGPTSLIEALTEGLSPSSDWNARVSAFNYVRSLLQQGAK
GTQEILQSFEKVMKLFFQHLDDPHHKVAQAALSTLAELVPACRKPFESYLERILPHVFSR
LIDPKELVRQPCSTALEIVGNTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFDKLM
NSSEGAANSGMLKLWLAKVAPLVNDKNPKLKEAAITSIISVYSHYDSISVLNFILGLSVE
EQNALRRALKQYTPRIEVDLMNFLQMKKERTRSKSYYDQQDVVGTSSEEGYVVSSKKSHF
FGRYSSGSIDSDGGRKWSSMQESIQIGASIAQTASDEPQDQYYPNFEAGSNTEDVLLSLR
NKDSKNSVNASIQRTGSWGEHLVSENVNRSLEFENSIGTPRLVDLGYVNSDGKGALGDKL
DSEVHPDGDQNHEKAIVLKINCVPESGPSIPQVLHQICNGNDEESSVRKNEALQLLLQVS
RQNNPSVWTKYFNQILTAVLEILDDPDSSIRELALSLIVEMLNNQKETMEDSVEIVLEKL
LHATRDVVPKVSSEADHCLTIVLSQYDSFRCLTVVVPLLVSEDEKMLVTCINCLTKLVGR
LSQEELMGQLPSFLPALFDAFGNQSADVRKTVVFCLVDIYIVLGKAFLPYLGGLSSTQLR
LVTIYANRISQARTGTAIDGNQV

NT seq 4392 nt +upstreamnt +downstreamnt
atggaggaggcgctggagatggcgcaggcgaaggatacgaaggagcggatggcaggggtg
gagctcctccagcagcatctcgagaactgccggaagcccctgccagcggcacaagtgacc
caattggtggactgctgcatggatctgctcaaagacaacaactttagggtttcccagggc
gcactccaggccctcacctccgctgctgtcctctcgggcgaacatttgaagctccatttc
aatgccctcctgccggcagccgtcgagagacttggtgatgcaaagcagcctgtaagggat
gcagctcgccgcctcctcattgctcttatgcaggtatcttcacccacaatcattgttgaa
agagctgggagttatggttggactcataagagttggagggttcgtgaagaatttgcacgg
acagtctcatccgcaatccatctttttgcagcaactgagcttccatttcaacgggtttta
cttgctccagtgctgcaattgttgaatgactcaaataatactgtgagagaagcagctgca
tcatgtattgaggagatgtatatgcaggtgggaccacaatttcgtgatgaattgcagcgg
catcatcttccatcctcaatggtgaaagagataaatgccagactggagaagctagaacct
aaggttcgtgcgtcggatgggcgtacaacgcaatttggttctgctgaaatgaagcctgca
gttgttcctacatttagccagaaaaaaagcagtccgaaaaccaagagtgttgcacgtgaa
acatctgtctttggaggtgagagtgatgttgcagagagacctatggacccagtaaaagtg
tattctgagaaggaattggttagagaatttgagaagattgcttccacacttgtaccagaa
caagattggtcagtcaggatagctgccatgcagagagttgaaggccttgtttttggaggt
gccacagactatccatctttcactacgttgttgaagcagttggtcggtcccttgagcatt
cagctttcagatcgacgttcaagcattgtgaaacaggcttgccatttgttatgcttatta
tcaaaggagcttttgggagattttgaggcttgcgcggaggtgtttatcccggtgcttttt
aagcttgttgtgataacagtacttgtaattgcggagtctgcagacaattgcattaaaacg
atgttgcgtaattgtaaagttgcacgtgtacttccacgaattgctgattttgcgaagcat
gaccgaagtgcagtcctccgtgccaggtgctgtgaatatgcactattaattcttgaatac
tgggctgacgcacctgaaatacagcggtcagctgacctttatgaagatcttataaaatgt
tgtgttgcagatgctatgagtgaggtacgttcaactgcaagaacctgctacaggatgttc
acaaaaacttggcctgagcgttctcgacgcctgtttttaagctttgatcctgtcatccag
aggataataaatgaggaagatgggggcatccacagaagatatgcttctccttctctccga
gagaggggtgtgcagcaactgcgagttccatctcagcctcctgccttatctaatttgcct
ggatatggaacttctgctattgttgcaatggatagaagtgcatcaatagctgcatctggg
ccctctctttcgtctggtagtgcgcttgtctcgcagatgaaacctcagggtaagggtact
gaaagaagccttgagagtgttctgcaggcaagcaaacaacaggtctccgccattgaaagc
atgctgagaggtctagatatctctgagaaacaaaattctctgtcgacctcatgcccttct
agtttggatctaggagttgaccctccatcagctcgtgatccacctcttcctgctgctgtc
cctgctagcaatcatctcacccatggttctggattttccaattcagctggagctaacatt
gccaaaggtagcattagaaatggaaccccaggtctaactgatttgacatctcaacttcct
gcctccaaagaacataacaagttatcatatttaagtaatctggcatcggatcccttgtcc
actctatcttacactgcaaagagagttcctatctcttctgagagatctctagagatcagt
acttttgaagacaatgtcgacattcgaccaactaggcgtatttcaaagtcagacatgtac
actgataggcatttccttgaaacatcttaccgagacgttggttctagggattcacagaac
catcatatccccaatttccagaggccccttctaagaaaacatgtagctgggagagcttca
gcgagtggaagagccagttttgatgatggtcagttcccaataggggagatgtctcactat
acagatggtccaacttcactcattgaagccctgactgaaggtctgagccctagctctgat
tggaatgctagggtttctgcttttaattatgttcggtcattgcttcaacaaggagcaaaa
ggcacacaagagatcttacagagttttgaaaaggttatgaagctgttcttccaacatctg
gatgatccccatcacaaagtggctcaggctgctctttctacacttgcagagcttgtccct
gcttgtagaaaaccatttgaaagttacctcgagaggattttaccccatgttttttctagg
ctaattgacccaaaggagcttgttaggcaaccttgttcaacagcattggaaattgttggt
aacacatatagcattgattctttgcttcctgctttacttcgttcacttgatgagcagcgc
tcccccaaggctaagttggctgtaattgagtttgccattagttcttttgataaacttatg
aatagttcggaaggtgctgccaatagtggaatgctgaagttatggcttgccaaggtggca
cctttggtcaatgataagaaccctaaacttaaggaggctgctattacaagcattatttcg
gtttattctcactacgattccatttctgttctgaactttatccttgggttatctgttgaa
gaacagaatgctttgaggcgagcccttaaacagtatacacctcgtattgaggttgatctc
atgaatttcctgcaaatgaagaaagagcgtactcgttcaaaatcatattatgaccaacaa
gatgttgttggtacgtcctctgaagaaggatatgtggtgtcttcaaagaaaagtcatttc
tttggtaggtattcttcagggtctattgacagtgatggaggaaggaagtggagttcaatg
caggaatccatacagataggagcctcaattgctcagacagcctctgatgaaccgcaagac
cagtactatccaaattttgaggctggatcaaacactgaagacgtgcttttgagtttacga
aacaaggattctaaaaacagtgttaatgcttctatacaaaggacgggttcatggggtgag
catctagtttctgaaaatgtcaatcgcagtttagagtttgagaattctataggaacacca
cgccttgttgatctcggatatgtaaactcagacggaaaaggagctttaggggacaagctt
gacagtgaagttcatcctgatggtgaccagaatcacgagaaggcaattgtactgaaaatc
aattgtgtaccagaatctggccctagcattcctcaagttctacaccagatttgcaatggg
aatgatgaagaatcatctgtaagaaaaaatgaggctcttcaactattacttcaagtttcc
cggcagaacaatccttctgtgtggaccaagtacttcaatcagatattgacagccgtactt
gagattttagacgatcccgattcatctatcagggagctggcgctttctttgatagttgaa
atgctcaacaatcagaaagaaaccatggaggattctgttgagatcgtcctcgaaaaacta
cttcacgccaccagggatgtggttccaaaggtttcatcggaagctgatcactgtttgaca
atcgttttatcacaatacgattcatttagatgccttacggtcgtcgtacctttattagtc
agtgaagatgagaaaatgctggttacttgtatcaactgtttgacaaagcttgtggggcgt
ctttcacaagaggaactgatgggtcagttaccttcatttttacctgcgctgtttgatgcg
tttggaaaccagagtgctgatgttcggaagactgtcgtattctgcttggttgacatttat
atcgtgctgggaaaagctttcctgccatatttgggtgggcttagtagcactcagctgcgc
ttagttaccatctatgcgaatcgcatatcacaggcgagaacaggtacagcaatagatgga
aatcaagtttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (24)   
   Pfam (24)   
All databases (58)   

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