KEGG   Amborella trichopoda: 18445785
Entry
18445785          CDS       T02990                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
  KO
K03253  translation initiation factor 3 subunit B
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18445785
   03012 Translation factors [BR:atr03012]
    18445785
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     18445785
Translation factors [BR:atr03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    18445785
SSDB
Motif
Pfam: eIF2A RRM_1 ANAPC4_WD40 IKI3 DPPIV_N
Other DBs
NCBI-GeneID: 18445785
NCBI-ProteinID: XP_006855977
UniProt: U5D4S3
Position
Unknown
AA seq 719 aa
MAEAMELPLPAHHLGSSSLIDVSKIDISNIDLDSIHLPPGDDFGIPSDDDVVAEEELEFD
SGFGSIIIVDNLPVVAPEKYEKLEIVIRKIFGQIGVIREGGLCMPVDQETKKTKGYCFIE
YSTPQEAQTAKDQTNGYKLDKSHVFAVYLFDEFDKYVNVPDEWVPPEIKPYTPGENLHHW
LTDEKARDQFVIRAGSDTEVLWNDPRQLKPELVYRRAFWTESFVQWSPLGTYLATVHRQG
AAVWGGAATFNRLMRYAHPLVKLIDFSPGEKYLVTYSSHEPSNPRDSQKVALVIFDVRTG
KVLREFKGSADDFATGGTGGVSGVSWPVFRWSGGREDKYFARIGKNAISVYETETFSLLD
KKSIKVENVMDFSWSPTDPILVLFVPEGGGGNQPARVSLVQIPGREELRQKNLFSVSDCS
MFWQSNGEYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPK
GHRFAVIHGENPRPDVSFYSMRSGRVSKLTTIKGKQANALYWSPAGRFIILAGLKGLNGQ
LEFYNVDELETMAVGEHFMATDVEWDPTGRYVATSVTSVHEMENGFNIWSFHGKLLYRIS
RDHFYQFLWRPRPASFLTLEKEEEIAKNLKKYSKRYEAEDQDVSLLLSEQDREKRRQLQE
EWDRWVKEWKRLHEEEKALREELRDGEASDEEEEYEAKEVEVEEILDVTEEVLSSYSYE
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcggaagccatggaattgccattaccagctcaccacctgggctcttcttcactcatt
gacgtctccaagatcgacatctcaaacatcgatctcgactccatccatctcccacctggt
gacgacttcggcataccaagtgatgatgatgtggttgcggaagaagagttggaattcgac
tctggtttcggaagcataataattgttgataatctcccagttgttgctcctgagaagtat
gagaagcttgaaattgttatacgaaagatatttggtcagattggtgtgattagagaagga
gggctttgcatgcctgttgatcaggagacgaagaagaccaaaggatattgcttcatcgag
tacagcactccacaggaagcacagacagctaaggaccagacaaatggttataagttggac
aagtcacatgtatttgctgtgtacctatttgatgaatttgacaaatacgtgaatgttcct
gatgagtgggttcctcctgaaataaaaccttacacacctggggagaacctacatcattgg
cttacagatgagaaagctcgagatcaatttgttattcgggcgggttctgacactgaggtt
ctatggaatgatcctaggcaattgaagcccgagctggtttatcgacgtgctttctggacg
gagagttttgttcaatggtctccacttgggacatacttggcgactgtacacaggcagggg
gcagctgtttggggaggtgccgctacgtttaaccgtttaatgcgttatgcccatcccctg
gttaaacttattgatttctcacctggggagaaatatctagtcacgtacagtagccatgaa
cccagcaatcctcgggactcacagaaagttgctctggttatttttgatgtgcgaactgga
aaagtattgagagaatttaaaggtagtgctgatgattttgccactggtggaactggaggt
gtgtctggtgtctcatggcctgtgttcagatggagcggaggaagggaagacaaatacttt
gcgagaattggaaaaaatgcgatcagtgtctatgaaacagagacttttagtcttcttgat
aagaaatctattaaagtagagaatgtcatggacttcagttggtctccaactgatcccata
ttggtactctttgtccctgaaggtggtggtgggaatcaaccagcaagagttagtctcgtt
caaattcctggacgagaggaattgaggcagaagaacctgttcagtgttagtgactgtagt
atgttctggcaaagcaatggagagtatcttgctgtaaaagtagaccggtacacgaagacc
aagaagagcacatacactggatttgagctctttcgcataaaggagagggacattccgatt
gaggttttggagcttgaaaacaagaatgacaagatcattgccttcgcgtgggagcccaaa
ggccacaggtttgcggtgattcatggagaaaaccccagaccagatgtgagcttctattct
atgcgaagtggccgggtctcaaaactcacgacaataaaaggcaagcaagcgaatgccctg
tattggtcacctgctggtcgatttatcatccttgctggcttgaaaggtttgaatgggcag
cttgaattctacaatgttgatgagcttgagaccatggctgttggtgaacatttcatggcc
actgacgttgagtgggatcctactggaagatatgtagcaacatccgttacttctgtgcat
gaaatggaaaatggattcaacatctggtctttccacgggaagcttttatacaggatctca
agagaccacttctatcagttcttgtggcggccaaggcctgcttcattcctgactcttgag
aaagaagaggagattgcaaagaacctcaagaagtacagcaaaagatatgaagcggaggac
caggatgtctcattgttgctcagtgagcaggacagggagaagaggaggcagcttcaggaa
gaatgggacaggtgggttaaagagtggaagcggctgcacgaagaagagaaggctttgagg
gaagagttgagagatggggaggcgagtgatgaggaggaagagtacgaggcaaaggaagtg
gaggtcgaggaaatcttggatgttacagaagaggttctgtcctcttatagctatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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