KEGG   Aegilops tauschii (wheat D): 109762678
Entry
109762678         CDS       T04345                                 
Name
(RefSeq) THO complex subunit 2-like isoform X1
  KO
K12879  THO complex subunit 2
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03013  Nucleocytoplasmic transport
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109762678
  09122 Translation
   03013 Nucleocytoplasmic transport
    109762678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109762678
   03041 Spliceosome [BR:ats03041]
    109762678
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109762678
Spliceosome [BR:ats03041]
 Complex C
  Other components
   EJC/TREX
    109762678
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109762678
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 FapA HetE-N
Other DBs
NCBI-GeneID: 109762678
NCBI-ProteinID: XP_020177140
Position
Unknown
AA seq 1798 aa
MSPPLQAPDYRYVTEECLREWKGQSAAAFRLPDPVPMARFLYELCWAMVRGDLPPQKCRA
ALDSVVFVEEARQEESASVLADIIAHLGQDITISGEYRSRLVKMTKSLVESSLIVPRLLQ
ERCEEEFLWEVELSKSKGQDLKAKEVRVNTRLLYQQTKFNLVREESEGYAKLVTLLCQVG
SDLACQNASSATISIVKSLIGHFDLDPNRVFDIVLECFELYPDNSIFYQLIPLFPKSHAA
QILGFKFQYYQQLDVNSPVPSGLFRIAALLVKSGLIDLDNLYAHLLPNDDEAFEHFGSFV
SRKIDEATKIGKINLAATGKDLMDEEKQEITIDLYTALEMENDIIDERAPEIEKNQKLGL
LLGFLSVHDWDHAQLLFERLAQLNPVEHVEICDALFRIVEKTISSAYSTYCQTHHKITRN
MDTHMMDASSVSSPSYLVDLPKEFFQMLVACGPYLHRDTQLFQKVCRVLKVYHASSKESA
RTAGVMSPESQVEEALGSCLLPSLQLIPANPAVDMEIWGVLSLLPYEVRYRLYGEWEKDT
EQNPIVLAARQTAKLDTRRLLKRLAKENLKQLGRMVAKLAHANPMTVLRTIVQQVEAYRD
MINPVVDAFKYLTQLEYDILQYIVIERLAQGGREKVKDDGLNLSDWLQCLASFWGHLCKK
HLSMELKCLFQYIVNQLKKGLGTELVVLEELIQQMANVQYTENMTDEQVDAMAGSETLRL
QSSLFGSTRNYKVLNKSTNKLRDSLLPKDEPKLAIPLLLLIAQHRSKIIINADATYIKMV
SEQFDRCHGILLQYAEFLSSAVAPSTYVQLIPPLEDLVYKYHIEPDVAFLIYRPVMRLFK
SANGGEACWPLDDNEEGESVSYDEMILHGDSSQKSIMWSDLLNTIRTILPAKAWNGLSPE
LYATFWGLTLYDLNFPKDRYDAEIKKLHENLKQLEDNSDNSSIAISRRKKDKERIQDLLD
KLNNESDKHQQHVISVLQRLTREKDKWLSSSPDALKINMEFLQRCIYPRCVLSMQDAVYC
ATFVQMMHSLGTPFFNTVNHIDVFICKTLQPMICCCTEYEAGRLGRFLHETLKMAYHWKS
DESVYERECGNKPGFAVYFRFPNSQRVSYPQFVKVHWKWSGRITKVLNQCMESKEYMEIR
NALIVLTKITSIFPVMRKSGINIEKRVAKLKGDEREDLKVLATGVAAALAARKSSWVSEE
EFGMGHLDLKPVPAKPIAGNQYADPSTAKDHSVRAKSVEGRHERSENAMKPDAHKKNAST
TNGSDIQMPSSSAQGKGSGLVRGVDEPPKLLSDDGVKVLKPTAEPETRAPQKRAVQNAAK
VSKHDVVKEDGKPGRSTSRGLNQQACAIPVDREVLSQAADGVLDTNPTSPLVGTNGNVHP
APRKVSASSQRSTVLAAHSGGTANPTGEGESADLIDSTVKQQKRSVPVEEQERTGKRRKG
EIEGRDGDLTEHHTDKEKKLDPRSVDKFRSVDHERGASEEQNLIRTEKLKEKFDDKYDRD
HREKADRSERRRGEDVVERPTDRSLERRERSIEKMQDRVPEKGREDRNKEERNKVKHEPI
DRAHTIKNEPIDRAYTIKHEPIDRAHTSDERFRGQSLPPPPPLPTSFVPQSVAANRRDED
SDRRGGSTRHTQRSSPRRDEKERWHLEENAPLSQDDGKHRREEDLRDRKREDRDVSSSKV
DDRDRDKGNTVKEDSDPNSASKRRKIKREQSALEAGEYAPSAPQPPSVGPGNSQFEIRER
ERKGAISQHRPSHADDLPRMHAKDSTSKTSRREADQTHDREWEEEKRPRTEAKRKHRK
NT seq 5397 nt   +upstreamnt  +downstreamnt
atgtcgccgccgctccaagcgccggactacaggtatgtcaccgaggagtgcctccgcgaa
tggaagggccagtcggccgccgccttccgcctccccgatccggtccccatggcccgcttc
ctctacgagctctgctgggcgatggtgcgaggggacctgccgccccagaagtgccgggcg
gcgctggattcggtggtctttgtggaggaggcgcggcaggaggagtccgcctccgtgctc
gccgacatcatcgcacacctagggcaggatattaccatttctggtgaatatcgcagccgt
cttgtcaaaatgactaagtcgctcgtggagtcttcattgattgtgcctaggcttcttcaa
gagcgatgtgaagaagagttcctatgggaggttgaactgagtaagtcaaaaggccaggat
ttgaaagccaaggaggtcagagtcaacacacgacttctttatcagcaaactaaattcaac
cttgtaagagaggaaagtgagggctacgccaagttggtaaccctactttgtcaagtaggt
tcagatttggcttgccaaaatgcttcttcagcaactatcagcattgtaaagtcattaatt
ggacattttgacctggacccgaatcgtgtatttgacattgtgttggaatgttttgaactc
tatccagacaacagtatcttttatcagcttatacctctttttccaaagtcccatgctgct
caaattttggggtttaaatttcaatattatcaacaattggatgtaaacagccctgttcca
tctggtcttttccgaatagcagcgctgttggtcaaatctggccttattgaccttgataat
ctctatgctcatttacttccgaatgatgatgaggcgtttgagcattttggctcctttgtt
tcaaggaaaattgatgaggctactaaaataggcaaaataaatcttgctgctactggaaag
gaccttatggatgaagagaagcaagaaataacgatcgatctatacacagcactggagatg
gaaaatgatataattgatgaacgagcccctgagatagaaaagaaccagaagcttggactt
cttcttggtttcctctcagtccatgattgggaccatgcacagctactatttgaacgtctt
gcgcagctaaatcctgtcgagcatgttgaaatttgtgatgctttatttagaattgttgag
aagactatttcgtcagcctacagtacatattgtcaaacacatcataaaatcacccgtaac
atggacactcatatgatggatgcatcatctgtctcttcaccaagttatttggttgatctg
ccaaaggagtttttccaaatgcttgtcgcatgtggaccataccttcaccgtgacacacaa
ttattccagaaggtttgcagagtgttaaaggtgtatcatgcctcgtcaaaagaatcagcc
cgtacagcaggtgtaatgtctccagaatctcaggttgaagaagcacttgggtcatgcttg
cttccttcattgcagcttatacctgccaatcctgctgttgatatggagatatggggagtt
ctttcccttcttccttatgaggtgcgctatcgtttgtatggtgagtgggagaaggacact
gaacaaaacccaattgtccttgctgcaaggcaaacagcaaagctggacaccagacggctc
ttaaaacggctggccaaggaaaatctgaagcagcttggccgcatggtggctaaacttgct
catgcaaatccaatgactgtgcttcggacaattgtccaacaggttgaagcatacagggac
atgataaatccagttgtggatgcttttaaatacttgactcagctggaatatgatatcttg
caatatattgtaatcgaacggttggctcaaggtggtcgtgagaaagtaaaggatgacggc
cttaacctgtcagattggcttcagtgtctggcatcattctggggacacctctgcaagaag
catctttccatggagcttaaatgcctcttccaatacatagttaatcaactgaagaaagga
ttgggtactgagcttgttgtacttgaggaactcattcagcaaatggcaaatgtacagtac
actgagaacatgactgatgaacaggttgatgctatggcaggaagtgaaacattgcggctt
caatcttcgctgtttggatcaacacggaactataaggtcctgaataagtctactaacaaa
ttgcgggattctttgcttccaaaagatgaacctaaacttgcaattcctctactactgctc
attgcccaacacagatccaagattataataaatgcagatgccacatatatcaaaatggtt
agcgagcagtttgatagatgccatggaatactgcttcagtatgccgagtttctttcaagt
gctgtagctccatcaacctatgttcaactaatacctccgctggaagatctagtttataaa
tatcatatcgagccagacgttgcttttcttatataccggcctgtaatgaggcttttcaaa
agcgctaacggtggcgaggcctgttggcctctggatgacaatgaagaaggggagtctgta
tcatatgatgaaatgatcttgcatggcgattcatctcagaagtcaatcatgtggtcagat
cttctcaacacaatccgaacaattttgccagcaaaagcctggaacggtctttcacctgaa
ttgtatgctactttctggggtttgacactgtatgatcttaattttccaaaagatcgttat
gatgcggaaattaagaagctgcatgaaaatctcaaacaacttgaagataactcagataac
tctagcattgcaatatcacggcgtaagaaggacaaggagagaatccaagatttgctggac
aaattgaacaatgaatctgacaagcatcaacagcacgttatatcagtgctccaaaggcta
acccgtgaaaaggataaatggctgagttccagtccggatgcactgaagatcaacatggaa
tttctccagcggtgcatatatccacgctgtgttcttagcatgcaggatgctgtgtattgt
gctacattcgtccagatgatgcattcacttgggactccatttttcaacacggtgaatcat
attgatgttttcatctgcaagacactacagccaatgatctgttgttgtaccgaatatgag
gctggcaggcttggaaggtttcttcatgagaccctgaagatggcttaccattggaagagt
gacgaatcagtatatgagcgtgaatgtggaaataagccgggattcgctgtatacttcaga
tttccaaatagtcaacgtgtatcttatcctcagttcgttaaagttcattggaaatggagt
ggaagaattaccaaggtgcttaatcaatgtatggaatcaaaagaatacatggaaatcaga
aacgcccttattgtgctcacaaagataactagtatttttcctgtcatgcgaaaaagcggt
atcaacatcgagaaaagggttgcgaagctaaagggggatgagagggaagatctgaaagta
ctggccactggtgtagctgctgctctggcagctcgcaagagttcatgggtatctgaagaa
gagtttggcatgggtcaccttgatctgaagccagtacctgcaaaacctattgctggaaat
cagtatgcagatccctcgacagcaaaagatcatagcgtccgtgcaaaatctgtagagggt
aggcatgaaaggtcagaaaatgcaatgaagcctgatgctcataagaagaatgcctcgact
acaaacggatctgatattcaaatgccatcttcctctgcacaaggaaaaggttcagggctt
gtacgtggtgtagatgaacctccaaaacttttgtccgatgatggagttaaagtcttgaag
cctactgcagaacctgagacaagagcgccacaaaagcgtgctgtacaaaatgctgcaaag
gtatctaagcacgatgtggtgaaggaagatggaaaacctgggagatctactagcaggggt
cttaatcaacaagcctgtgctattcctgttgacagagaagtattgtctcaggcagctgat
ggtgtgctggatactaatcccactagtccgttggttggcacaaatggtaatgtacatccg
gcaccacgaaaggtatctgcatcctcccaaagatcaacagtattggctgcacatagcggt
ggaacagctaatcccaccggtgaaggtgaatctgctgacttgattgattctaccgtgaaa
cagcaaaaaagatctgttcccgttgaagaacaagagaggacaggtaaacgaaggaaagga
gagattgaaggcagggatggtgacttgacagagcaccatacggacaaagaaaaaaaattg
gacccgcgatcagtagataaatttcgttctgtggatcatgagagaggtgctagtgaggaa
caaaacctaattcggacagagaaattaaaagaaaagtttgatgataaatatgacagagat
catagagaaaaagcagatcggtctgagaggcgccgtggagaagacgtggttgaacgacca
acagacagatcattggaaaggagagagcgttctattgaaaagatgcaagacagagttcct
gaaaaaggaagagaagacaggaataaggaggagaggaacaaagttaagcatgaacccata
gatcgagcacatactattaagaatgaacccatagatcgagcatatactattaagcatgaa
cccatagatcgagcacatacttctgatgaacgcttccgagggcaaagcttgccaccacct
ccacctcttccaactagttttgtaccccaatcagtcgctgctaaccgaagagatgaagac
agtgaccgaaggggcggcagcaccaggcatacccaacggtcgtctcccaggcgtgatgag
aaagaaaggtggcacttggaggagaatgctccgctctcgcaggatgatgggaagcacaga
agagaggaagatcttcgggatagaaagcgtgaagatagggatgtttcatcaagcaaggta
gacgacagggatagggacaaaggtaatactgtgaaagaagatagtgatcctaatagtgca
tccaaacggcggaagatcaaaagagaacagtctgctttggaagctggggaatatgcgcct
tctgctccacagcctccgagcgttggacctggtaactcacagtttgaaatacgagagaga
gaaagaaagggtgctatttcacagcatcggccatcacatgctgatgaccttcctaggatg
catgccaaggattcaacaagcaagacaagtcgtagagaggctgaccaaacacatgataga
gagtgggaagaggagaagaggccaaggactgaagcaaaaaggaagcatcggaagtag

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