KEGG   Aegilops tauschii (wheat D): 109787314
Entry
109787314         CDS       T04345                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 2-like
  KO
K13025  ATP-dependent RNA helicase [EC:3.6.4.13]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03013  Nucleocytoplasmic transport
ats03015  mRNA surveillance pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109787314
  09122 Translation
   03013 Nucleocytoplasmic transport
    109787314
   03015 mRNA surveillance pathway
    109787314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109787314
   03041 Spliceosome [BR:ats03041]
    109787314
   03009 Ribosome biogenesis [BR:ats03009]
    109787314
   03012 Translation factors [BR:ats03012]
    109787314
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109787314
   mRNA cycle factors
    Stress granule specific factors
     109787314
Spliceosome [BR:ats03041]
 Complex C
  Other components
   EJC/TREX
    109787314
Ribosome biogenesis [BR:ats03009]
 Eukaryotic type
  90S particles
   Helicases
    109787314
Translation factors [BR:ats03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    109787314
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 AAA_22 AAA Helicase_RecD TniB UvrD-helicase
Other DBs
NCBI-GeneID: 109787314
NCBI-ProteinID: XP_020201470
Position
Unknown
AA seq 413 aa
MAAAAGGATTSTRRGPGGGGRPMDDENLTFETSAGVEVVGSFDAMGIREDLLRGIYGYGF
EKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSMISLSVCQVIETNVHEVQALILSPTREL
ATQTERVMQAVGNFMSVSVHACVGGKSIGEDIRKLESGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVR
ILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMR
TNNFTVSAMHGDMPQKERDAIMSEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcggcggcggcgggcggcgcgacgacctcgacgaggcgcgggccgggcggcgggggc
cggccgatggacgacgagaacctgaccttcgagacctccgcgggggtggaggtcgtgggc
agcttcgacgccatggggatccgcgaggacctcctccgcggcatctacggctacggcttc
gagaagccctccgccatccagcagcgcgccgtcatccccatcatcaccggccgcgacgtc
atcgcgcaggcccagtccggcaccggcaagacctccatgatctccctctccgtctgccag
gtcatcgagaccaacgtccacgaggtgcaggcgctgatactgtcgccaactagggaactg
gcgacgcaaacagagagggtgatgcaggctgttggtaactttatgagcgtctctgtgcac
gcctgtgttggtggcaaaagtatcggcgaggacattaggaagctcgagtctggagtgcat
gttgtttcaggaaccccgggcagagtatgtgatatgatcaagagaaggaccttgcgcaca
agggccatcaagctcctagtcctggacgaagccgatgagatgttgagcagaggtttcaag
gatcagatatatgatgtctacagatatcttcccccagaacttcaggttgttttgatctct
gcaactttgccccatgacatcttggagataactagcaagttcatgactgatccagtcagg
atccttgtaaaacgtgatgagttgaccctagagggcatcaaacaattctttgttgctgtt
gagaaagaggaatggaagtttgatacactgtgcgatctttatgatacacttaccatcacc
caagctgtcattttctgtaacactaagagaaaggtggattggcttactgaaaggatgcgc
accaacaacttcacggtgtcagctatgcacggtgacatgcctcagaaggaaagggatgcg
atcatgagtgagttcaggggtggcacgacccgtgttctgatcacaaccgatgtttgggct
cgagggctggatgtccagcaggtctctcttgtcattaattacgatctccccaacaaccgt
gagctttacatccatcgtattggtcgctctgggcgtttcgggcgcaagggtgtggcgatc
aactttgtgcgcaaggatgacatccgtatccttcgggacatcgagcagtactacagcacg
cagatcgacgagatgcccatgaacgtcgccgatcttatctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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