KEGG   Acinetobacter sp. TTH0-4: AMQ28_06245
Entry
AMQ28_06245       CDS       T04075                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
att  Acinetobacter sp. TTH0-4
Pathway
att03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:att00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMQ28_06245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:att03019]
    AMQ28_06245
   03009 Ribosome biogenesis [BR:att03009]
    AMQ28_06245
Enzymes [BR:att01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     AMQ28_06245
Messenger RNA biogenesis [BR:att03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AMQ28_06245
Ribosome biogenesis [BR:att03009]
 Prokaryotic type
  rRNA processing factors
   AMQ28_06245
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ALD02004
UniProt: A0A0M4HA33
Position
1318136..1321552
AA seq 1138 aa
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNIPRGMSVIVRTAGIGRSQEELQL
DLQHLMDLWAQIQTTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLEKLKTYTLNEPLFAHFAIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEDTALSTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHTLVYLEQTSNVRVTVLPHPHLETPHY
EITYNAEGFAPTSYERTEATRSSEKELGYESSEWHLEEEQHVQNTAQTVQQPERNNKKQP
QHQQAAQTQHQAIVPAVPSTSPCAWLENLFVQKQAATVDQSRSANNAAAAIEQMVNGGAV
SRGQFGQVAASVPVAHTPVSTANNNAYLAPSAPTPPKPEQREVNDRYSDKEEKSQRHNKK
RVNKPKEQREQVQHDNQHNQVHEEIVQAPRHEQRQEQRHEQRQDPRHEPRQDSRENKRPV
RRQQVEQQNSDTPTEQNAVPRRDRNNQQRPNRPNRHRDQSVLNEQIAPETVVSALPTATE
QSPKVEVIDAPRQQVIPTALVVNLDEAKSEIVALHSAKPIAETPVAQSAPVESKEVVTKT
PVAAVAEKAAIAPSKPESKQAGSADQRASNDPRMRRRQKRGAQVKQAQAPKLNPSQVPTL
GQYTVGSLIRHVYGEDCSVLIEQFGLIPTFNRALVKFTEQYAATLSHQETETDVAAQPVT
RDVAITKATPEAEPAPVLDLTPPSTVSDNRVANDPRERRRLAKLAAEQALEQAKQSHSEP
SAEKAVPDETPSSESKVEVEQKSAIDETPVVEMNETPETVAEPTPTIQPVKAAPSAKVVI
EKPVQTELAVDAAQDVQALAEPKSDTDKPETEDEADKPVRPRRPRGRPPKKATPASES
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgaaacgtatgttgattaatgcaacacatgccgaagagattcgcgttgcacttgtcact
ggtcagcgtctttacgattttgatttagagaatcgtacccgtgaacaaaaaaaatccaat
atctataaaggtcacgtgactcgcgttgaaccttctttagaagctgtctttgttgagtac
ggtgcaggtcgtcaaggctttctctcaatgcgtgaaatcgcaaactcatattacaaagca
gaccctcgccaaacttcaaacatccgcgaattaatcactgaaggtactgaacttttagtg
caagtggaaaaagaagaacgaggcaataaaggtgcagcgttatctacttttatttcactt
gcaggtcgttatttggtccttatgccaaacaacccaaaaggtggcggtattagtcgtcaa
atttcaggttcagttcgtgaagaattgaaagaaatgctggcatcactcaatattccacgc
ggcatgagcgtcattgttcgtactgctggtattggccgttcgcaagaagaattacaactc
gatttacaacacttgatggatctttgggcacaaatacaaaccacagcaagttctggccca
tcgccaatgttagttcatcaagaagcaggcgtggtgacacgtgctattcgcgactattta
cgtgatgatgttgcagaaatcttaattgactctgaacaagcttataacgaggcttataac
ttcgtaaaagcagtgatgccacgccaattagaaaaactaaaaacttatactttaaatgag
ccattatttgctcattttgcgattgaaagccaaattcaaaccgcttatgaacgcgaagtt
aaactgccatctggtggttcaatcgtaattgatcaaactgaagccttggtgtcaattgac
attaactcagcaaaatcgacacgtggtcatgacgttgaagatacggctttaagtactaat
ttagaagcggcagaagaaatcgcgcgccaactacgtttacgcgatattggcggtctagta
gtgatcgattttatcgacatgaccaaagaccgcaaccagcgtatggttgaagcgaaactt
cgtgaagcaacgcaaagcgaccgtgctcgtattcaattcggccaattgtctcgttttggt
ttaatggaaatgagccgtcaacgcttacgtccatcgcttgaagaagcaacaggttatgtg
tgcccacgttgtcatggcacaggtatggtgcgtgacttacgctctctttcactctcaatt
atgcgtaaagttgaagaaattgcgcttcgtgagcgtcatggtgaagttcaagttgaagtt
ccagttgaaattgcagcatttttgttgaatgaaaaacgtcatactttggtttatttagaa
caaacctcaaatgtacgtgtcactgtgttgcctcatccgcacttagaaacgccacattat
gaaattacttataatgctgaaggctttgcaccgactagttatgaacgtacagaagcaacg
cgttcaagtgaaaaagaattgggttatgaatcttctgaatggcatttagaagaagaacaa
cacgttcaaaataccgctcaaacagtacaacaaccagagcgcaataacaaaaagcagcca
caacatcaacaggcagctcaaacacaacatcaagcgattgtgcctgctgtaccatcaacc
agtccatgcgcttggcttgaaaacctgtttgtacaaaaacaagcagcgactgtagatcag
tcacgttcagccaataatgcagccgcagcaattgaacaaatggtgaatggtggtgctgtt
agtcgcggacaatttggccaagttgcagcgtctgtgcctgttgctcacacccctgtttca
acggcaaataataatgcttatttggctccaagtgcgcctactcctccgaaaccagaacaa
cgtgaagtgaacgatcgttattctgataaagaagaaaaatcgcaacgccataataaaaaa
cgcgtaaacaagccaaaagagcaacgcgaacaagttcaacatgacaatcaacacaaccaa
gtgcatgaagaaattgttcaagctcctcgtcatgaacagcgtcaagagcaacgccatgaa
cagcgtcaagacccacgccatgaaccacgtcaggactcacgtgaaaataaacgtccagtt
cgacgtcaacaggtagaacagcaaaattcggatactccaaccgaacaaaatgcagttccg
cgccgtgaccgtaataaccagcaacgtccgaatcgcccaaatcgtcatcgcgatcaaagc
gttctgaatgagcaaatcgcacctgaaactgtggtaagcgcattaccaacagcaacggag
caatcacctaaagttgaagtgattgacgcacctcgtcagcaggttataccaactgcattg
gtggtcaatcttgatgaagcgaaaagtgaaattgtggcacttcactcagcaaaacctatt
gctgaaacacctgttgcgcaatctgcaccagttgaatctaaagaagtagtgactaaaacc
ccagttgcagcagtagcggaaaaagcagcaattgctccatcaaaaccagagtcaaaacaa
gcaggttctgctgatcagcgcgcgagtaatgatccacgtatgcgtcgtcgccagaaacgt
ggtgctcaagtaaaacaagcccaagcaccaaaactaaacccatctcaagttccaactttg
gggcagtacactgtgggtagtttaattcgccatgtctatggtgaagattgttccgtttta
attgaacaatttggtttaattccaacgttcaatcgtgccttggttaaatttactgagcaa
tatgcagccactctttcgcatcaggaaactgaaacggatgttgcagcacagcccgtgaca
cgtgatgttgctatcaccaaagcgacaccagaagctgaacctgcgccagtgttagattta
acaccaccaagcactgtttcagacaaccgtgttgccaatgatccacgtgagcgtcgtcgt
ttggctaaattggctgcagaacaagctttagagcaagctaagcaatcgcatagcgaacct
tcagctgaaaaagcagtgccagatgaaaccccatctagtgaaagcaaggttgaagttgag
caaaaatcagcaatagacgaaacaccagttgttgagatgaatgaaacacctgaaaccgta
gcagagccaacgcctactattcagcctgtaaaagcagcacccagtgcaaaagtagtcatt
gaaaaacctgtacaaacggagttggcagtcgatgccgctcaagatgtacaagctttggct
gaaccaaaatcggatacagacaaacccgaaacagaggatgaggcagacaaacctgtacgc
cctcgtcgtccacgcggccgtccaccgaagaaagcaacgcctgcaagcgagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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