KEGG   Agrobacterium fabrum: Atu0349
Entry
Atu0349           CDS       T00070                                 
Symbol
trpS
Name
(GenBank) tryptophan-tRNA ligase
  KO
K01867  tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Organism
atu  Agrobacterium fabrum
Pathway
atu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Atu0349 (trpS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:atu01007]
    Atu0349 (trpS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:atu03016]
    Atu0349 (trpS)
Enzymes [BR:atu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.2  tryptophan---tRNA ligase
     Atu0349 (trpS)
Amino acid related enzymes [BR:atu01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Atu0349 (trpS)
Transfer RNA biogenesis [BR:atu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Atu0349 (trpS)
 Prokaryotic type
    Atu0349 (trpS)
SSDB
Motif
Pfam: tRNA-synt_1b
Other DBs
NCBI-ProteinID: AAK86166
UniProt: Q8UIE8
Position
circular:344570..345634
AA seq 354 aa
MNAFKPLVFSGVQPTGNLHLGNYLGAIRKFVALQEDNDCIYCVVDMHAITAQLVHSDLKA
QTRSIAAAFIAAGIDPVKHIVFNQSAVPQHAELAWVFNCVARIGWMERMTQFKDKSGKNA
EQVSLGLLAYPSLMAADILVYRATHVPVGDDQKQHLELARDIAQKFNIDFGGHIRNAGLG
VNITVGDEPVHAYFPMVEPLIGGPAPRVMSLKDGTKKMSKSDPSDLSRINLMDDVDAISK
KIKKAKTDPDALPSEVEGLKGRPEAENLVGIYAALSDKTKADVLAEFGGQQFSTFKPALV
ELAVNVLAPVNNEMRRLLDDPTHIDAILSQGGERARTIAEKTMNEVRDIIGFLR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgaacgcattcaagccgctggttttctcgggcgtccagccgaccggcaatctgcatctc
ggcaattatctcggcgcgatccgcaaattcgtggcgctgcaggaagataacgactgcatc
tattgcgtcgtcgacatgcacgccatcaccgcccagctcgttcactcggacctgaaggcg
cagacccgctcgattgcggccgccttcatcgcagccggcatcgatcccgtgaagcatatc
gtcttcaaccagtccgcggtgccgcagcatgcggaactggcatgggtcttcaactgtgtg
gcgcgcatcggctggatggagcgcatgacccagttcaaggacaagtccggcaagaatgcc
gaacaggtctcgctcggcctgctcgcctatccgagcctgatggctgccgacattctcgtc
tatcgcgccacgcatgttcccgtcggcgatgaccagaaacagcacctcgaactcgcccgc
gatatcgcccagaaattcaacatcgatttcggcggccatattcgcaacgccggtctgggc
gttaatatcacggttggcgatgagccggtgcacgcttatttcccgatggtggagccgctg
atcggtggcccggcgccgcgcgtcatgtcgctgaaggacggcaccaagaagatgtcgaag
tccgacccttccgatctgtcgcgcatcaatctgatggacgatgtcgacgcgatctctaag
aagatcaagaaggcgaagaccgatccggacgcgctgccgagcgaagtggaaggcctgaag
ggccgccccgaggccgaaaacctcgtcggtatctatgctgcgctctccgacaagaccaag
gcggatgttcttgccgaattcggcggtcagcagttctccaccttcaagccggccctcgtg
gagcttgccgtcaatgtgctggcgccggtaaacaacgagatgcgccgtcttctcgatgat
ccgacccatattgacgccatcctcagccagggcggcgagcgggcacggactatcgctgaa
aagacgatgaacgaggtgcgcgatatcatcggtttcttgcgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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