KEGG   Agrobacterium fabrum: Atu4457
Entry
Atu4457           CDS       T00070                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
atu  Agrobacterium fabrum
Pathway
atu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Atu4457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atu03400]
    Atu4457
Enzymes [BR:atu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Atu4457
DNA repair and recombination proteins [BR:atu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Atu4457
 Prokaryotic type
     Atu4457
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH Urocanase_N Cdd1 HHH_5
Other DBs
NCBI-ProteinID: AAK88984
UniProt: Q7CV04
Position
linear:complement(1602440..1603222)
AA seq 260 aa
MTVAKKRSSTQTLKKSIPAQRRKPVRVKTAYSKDELTEIFRRFSIQRPEPKGELEHTNPF
TLLVAVALSAQATDVGVNRATRALFKVADTPEKMLALGEEQLIGHIKTIGLYRNKAKNVI
ALSQMLIDNFGGEVPKTREELVTLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTTDEVEDRLVRIIPEQYLFHAHHWLILHGRYCCKARKPECERCVIADICKSPEKTF
DIPAPLVELPAQLFGAAGGE
NT seq 783 nt   +upstreamnt  +downstreamnt
atgacagtcgccaagaaacgatccagcacccaaacattgaaaaagtcaattccggcgcag
cggcgcaaacccgtgcgggtgaaaacggcctattcgaaggacgaactcaccgaaatcttc
cgccgtttttccatccagcggccagagccgaaaggcgagctggaacacaccaatcccttc
accctgctggtagccgtggcgctttccgcgcaggcgaccgatgtcggtgtgaaccgggcg
acccgcgccctgttcaaggtggcggatacgccggaaaaaatgctggcgctcggtgaggaa
caactgatcggccatatcaagaccatcggcctctaccgcaacaaggcaaaaaacgtcatc
gcgctatcgcagatgctgatcgacaatttcggcggcgaggtgccaaaaacccgcgaggag
ctggtgaccctgccgggggtcggcaggaagacggccaatgtggtgatgtcgatggccttc
ggcgtgccgacgcttgcagtggacacacatgtgttccgcattgccaaccggctctgtctt
gcgcccggcaaaaccactgacgaggtagaagaccggctggtccgcatcatccccgaacaa
tatctgttccatgcgcatcactggctgatcctgcatgggcgttattgctgcaaggcgcgc
aagccggaatgcgaacgctgcgtgattgccgatatctgcaaatcgccggaaaagaccttc
gatattccagccccgctggtggaactacccgcgcagctgttcggtgccgccggcggcgaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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