KEGG   Agrobacterium fabrum: Atu4540
Entry
Atu4540           CDS       T00070                                 
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain
  KO
K00449  protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Organism
atu  Agrobacterium fabrum
Pathway
atu00362  Benzoate degradation
atu01100  Metabolic pathways
atu01120  Microbial metabolism in diverse environments
atu01220  Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:atu00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    Atu4540 (pcaH)
   00624 Polycyclic aromatic hydrocarbon degradation
    Atu4540 (pcaH)
Enzymes [BR:atu01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.3  protocatechuate 3,4-dioxygenase
     Atu4540 (pcaH)
SSDB
Motif
Pfam: Dioxygenase_C PCDO_beta_N CarboxypepD_reg SdrD_B
Other DBs
NCBI-ProteinID: AAK88903
UniProt: Q7CV77
Position
linear:complement(1686456..1687196)
AA seq 246 aa
MSNQPPETGPFFARNRDIHPLAYAPGYKTSILRSPQRALISLEGTKSEITGPVFGHGVLN
PLDNDLILNYARPGEMPVGPRILVHGRVLDERGRGVDGALVEFWQANAGGRYRHKKESYL
AAIDPNFGGVGRTITDENGYYWFKTIQPGAYPWPNGVNDWRPAHIHFSVFGHGFAQRLIT
QMYFEGDPLIWKCPIVKTIPDEDAIKRLIAPLDMNAALPMDMLAYKFDIVLRGRRSTLFE
NRMEGN
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagcaaccaaccgcctgaaaccgggccgttcttcgcgcgcaaccgcgatattcacccg
ctggcctatgcgcccggctacaagacgtcgatccttcgctcaccgcagcgcgcgctgatt
tcgcttgagggcaccaagagcgagattaccggccccgttttcggccatggcgtgctcaac
ccgctggataacgacctcatcctcaactatgcccgccccggcgaaatgcccgtcggcccg
cgtattctggtccatggccgggtgctggacgagcgtggccgcggcgtggatggcgcattg
gtggagttctggcaggccaatgccggcggccgttatcgtcacaagaaggaaagttatctc
gccgccatcgatccgaatttcggcggcgtcggccgcacgattacggatgagaacggctac
tactggttcaagaccatccagccgggcgcttacccctggccaaacggcgtcaatgactgg
cgcccggcccatatccatttctcggtcttcggccatggctttgcccagcggctgatcacc
cagatgtatttcgaaggcgatccgctgatctggaaatgtccgatcgtcaagaccattcca
gacgaggatgcgatcaaaagactgatagcgccgctggacatgaatgcggcgctgccgatg
gatatgctggcctataagttcgatatcgttctgcgcggccgccgctcgacccttttcgaa
aaccgcatggagggcaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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