KEGG   Agrobacterium fabrum: Atu6127
Entry
Atu6127           CDS       T00070                                 
Symbol
traA
Name
(GenBank) OriT nicking enzyme, Dtr system
Organism
atu  Agrobacterium fabrum
SSDB
Motif
Pfam: MobA_MobL AAA_30 Bep_C_terminal AAA_19 Viral_helicase1 UvrD_C_2 AAA_22 AAA_11 SH3_13 PIF1 ABC_tran HeLo AAA_16 ATP_bind_1
Other DBs
NCBI-ProteinID: AAK91091
UniProt: Q44349
Position
Ti:143987..147289
AA seq 1100 aa
MAIAHFSASIVSRGDGRSVVLSAAYQHCAKMEYEREARTIDYTRKQGLVHQEFILPADAP
KWVRALIADCSVAGASEAFWNKVEAFEKRSDAQLARDLTIALPRELTSEQNIALVRDFVE
KHILGKGMVADWVYHDNPGNPHIHLMTTLRPLTEDGFGAKKVAVIGEDGQLVRTKSGKIL
YELWAGSTDDFNVVRDGWFERLNHHLTLGGIDLKIDGRSYEKQGIDLEPTIHLGVGAKAI
SRKAEQQGVRPELERIELNEERRSENTRRILKNPAIVLDLIMREKSVFDERDVAKVLHRY
VDDPAVFQQLMLRIILNPEVLRLQRDTIEFATGEKVPARYSTRAMIRLEATMARQAMWLS
DKETHAVSTAVLAATFGRHGRLSEEQKAAIECIAGPARIAAVVGRAGAGKTTMMKAAREA
WELAGYRVVGGALAGKASEGLDKEAGIESRTLSSWELRWNRGRDVLDNKTVFVMDEAGMV
ASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAELETIYRQREDWM
RKASLDLARGNVEKALALYNANARIVGERLKAEAVERLIADWNRDYDQTKTTLILAHLRR
DVRMLNVMAREKLVERGIVGEGHVFRTADGERRFHAGDQIVFLKNETLLGVKNGMIGHVV
EAVPNRIVAVVGDRDHRRHVVVEQRFYSNLDHGYATTIHKSQGATVDRVKVLASLSLDRH
LTYVAMTRHREDLQLYYGCRSFAFNGGLAKVLSRKNAKETTLDYERGKLYREALRFAENR
GLHIMQVARTMLRDRLDWTLRQKTKVSDLVHRLRALGERLGLDQSPKTQTMKEAAPMVTG
IKTFSGSVADTVGDKLGADPTLKQQWEEVSARFRYVFADPETAFRAVNFDTVLADKEAAK
AVLQKLEAEPASIGALKGKTGILASKTEREARRVAEVNVPALKRDLEQYLRMRETATLRI
VTEEQALRQRVSIDIPALSPAARVVLERVRDAIDRNDLPAALGYALSNRETKLEIDGFNQ
AVTERFGERTLLSNVAREPSGKLYEKLSDGMRPEQKEQLKQAWPIMRTAQQLAAHERTVQ
SLKQAEELRQTLRQAPVLKQ
NT seq 3303 nt   +upstreamnt  +downstreamnt
gtggccatcgcccacttctcagccagcatcgtcagccgcggcgacggccgcagcgtggtg
ctgtctgcggcctaccagcactgcgcgaagatggaatacgagcgcgaggcccgcaccatc
gactacacccgcaagcaagggctggtgcatcaggaattcatactcccggcggatgccccg
aaatgggtccgcgcgttgattgcagactgttctgtcgccggggcctctgaggccttctgg
aacaaggtcgaggctttcgaaaaacgctccgacgcgcagctggcccgcgacctgacgatt
gcactgccgcgggagcttacatccgagcagaacatcgccctggtccgtgatttcgtggag
aaacatatcctggggaagggcatggtcgccgactgggtctatcacgacaatcccggcaat
ccgcacatccacctgatgaccacattgcggccgctaaccgaggacgggttcggggccaag
aaggtagcggtcattggtgaggacggccagctggttcgcacgaaatccggcaaaatcctc
tacgaactttgggccggttcgacggacgatttcaacgtcgtgcgcgatggatggttcgaa
cggctgaaccatcacctgacgcttggcggcatcgatctcaagatcgatggccgctcctac
gagaagcagggaatcgacctcgaaccgacgatccatctcggagttggcgccaaggcaatc
tcgcggaaagcggaacaacagggtgttcggccggagctcgaaaggatcgaactgaacgaa
gaacgccgctcggaaaacacccgccgcatcctcaaaaatccagccatcgtgctcgacctg
atcatgcgggaaaagagcgtcttcgatgaacgcgacgtcgcgaaagtgctgcaccgctat
gtcgacgatcccgccgtcttccagcagctgatgttgcgcatcatcctgaatccggaggtg
ctacggctgcagcgcgacacgatcgagttcgcgaccggagagaaagtgccggcgcgctat
tcgacacgggcgatgatccggctggaagcgacgatggcgcgacaggcgatgtggctgtcg
gacaaggaaacgcatgccgtttccacggcggtgctcgcagcgacttttgggcggcatggg
cggctgtcggaggaacagaaagcagccatcgagtgcatcgccggtccggcacgcatcgcc
gcggtcgtcggacgcgcgggtgctggcaagaccacgatgatgaaggcggcgcgggaggcg
tgggagctggccggatatcgtgtcgtcggtggcgcgctcgccggcaaggcgtcggagggt
ctggataaggaagccggcatcgagagccgcacgctctcctcctgggagctgcgctggaac
cgcggtcgtgacgtgctcgacaataaaaccgtcttcgtcatggacgaggccggcatggtg
gcctcgaaacagatggcgggctttgtcgatgccgtcgtcagggcaggggcaaagatcgtg
ctagtcggcgatcccgagcagcttcagccgatcgaagcgggggccgctttccgcgccatt
gtcgatcggattggttacgctgaactcgaaacgatctatcgccagcgcgaggactggatg
cgaaaggcgtcgctcgatctggcgcgcggcaatgtcgagaaggcgttggcgctctacaat
gccaatgcgagaattgttggcgaacgtctgaaggcggaagcggttgagcgcctgatcgcc
gactggaaccgtgattacgatcagacgaagacgacattgatcctcgcccatctgcgccgc
gacgtgcgcatgctcaacgtcatggcgcgcgagaagctggtcgagcgcggcatcgtcggc
gagggccacgtcttcagaacggctgacggcgaacgccgtttccacgcaggcgatcagatc
gtcttcctgaagaatgagaccttacttggggtcaagaacggcatgatcggccatgtcgtt
gaggctgtgccaaaccgcatcgttgcggtggtcggggatcgggatcatcggcggcatgtt
gtggtcgaacaacgcttctacagcaatctcgatcacggctatgcgacgaccatccacaag
tctcagggcgccactgtcgacagggtcaaggtgctggcctctctctcgctcgatcggcat
ctgacctatgtcgcgatgacccgccatcgcgaggatctccagctctattacggatgccgt
tccttcgccttcaacggtggcctagccaaggttctttcccgaaagaacgccaaggagacg
acgctcgattacgagcgcggcaaactctaccgcgaggcgctgcgctttgccgaaaaccgt
ggcctgcacatcatgcaggtggctcgaacaatgctgcgcgaccggctcgactggacgctg
cgccaaaaaacaaaggtttccgatctcgttcataggcttcgtgcgctcggtgagcgcctc
ggcctcgaccaatccccaaaaacccaaacgatgaaggaggccgcgcccatggtcacaggc
atcaagacattctccggctctgttgccgatacggtcggtgacaagctcggcgccgatccc
acgctgaagcagcaatgggaggaggtctcggcgcgcttccgctacgtcttcgccgatccc
gaaaccgccttccgcgccgtcaacttcgatacggttctggcagataaggaggcagcgaaa
gcggtcttgcagaagcttgaggcggagccggcatcgatcggggcgctgaagggcaagacc
ggtattctggccagcaagacggagcgcgaagcgcgccgcgtcgcagaggtcaatgttccc
gccctgaagcgcgatctggagcaatatctgcggatgcgcgagaccgcgacgctgcggata
gtgaccgaagaacaagccctgcgccagcgcgtctcgatcgacatcccggcgctctcgccg
gccgcacgcgtggtgcttgagcgcgtgcgcgacgcgatcgaccggaacgatctgccggcg
gcccttggatatgcgctcagcaatcgcgagaccaagctcgagatcgacgggttcaaccag
gctgttaccgaacgcttcggggagcggaccctgctgagcaacgtggcgcgcgagccgtcc
ggaaagctgtacgaaaaactctccgatggtatgcggccggagcagaaagagcagttgaag
caagcctggccgatcatgcgcacggcccagcagctcgccgcccacgagcgcaccgtgcag
tcgctgaaacaggccgaggaattgcggcagacgttgcgccaggcaccggtgctgaaacaa
tga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system