KEGG   Trichormus variabilis: Ava_4121
Entry
Ava_4121          CDS       T00277                                 
Name
(GenBank) Photosystem II reaction centre protein PsbA/D1
  KO
K02703  photosystem II P680 reaction center D1 protein [EC:1.10.3.9]
Organism
ava  Trichormus variabilis
Pathway
ava00195  Photosynthesis
ava01100  Metabolic pathways
Module
ava_M00161  Photosystem II
ava_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:ava00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    Ava_4121
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ava00194]
    Ava_4121
Enzymes [BR:ava01000]
 1. Oxidoreductases
  1.10  Acting on diphenols and related substances as donors
   1.10.3  With oxygen as acceptor
    1.10.3.9  photosystem II
     Ava_4121
Photosynthesis proteins [BR:ava00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    Ava_4121
SSDB
Motif
Pfam: Photo_RC
Other DBs
NCBI-ProteinID: ABA23720
CyanoBase: Ava_4121
UniProt: Q3M5L6
Position
complement(5135070..5136140)
AA seq 356 aa
MSTIVQRQKEFNFFDLWDSFCAWITSTENRIYIGWFGVLSIPTLLAATTCFVLAFIAAPS
VDMDGIREPIMGSLMDGNNLITAAVVPTSAAIGLHFYPIWEAASMDEWLYNGGPYQLIVL
HFLIGIWCLLGRFWELSYRLGMRPWIAVAYSAPVIAATSVLLVYPIGQGSFSDGLPLGIA
GTFHFMLAFQGDHNILMHPFHMLGVAGVFGGALLSSLHGSLVASTLIRNTDENESINGGY
KLGQQQVTYKYLAGHNSFLGRLLIPTFASRNHRAFHFLLAALPTIGIWFAAMGVCSMAFN
LNGLNFNHSILDSRGNVIRSDADILNRANIGLSVMHAPNVHNFPLVLSSGQPIPVS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtaccattgttcaacgtcaaaaggaatttaatttttttgatttatgggatagtttt
tgtgcgtggattaccagcacagaaaatcggatttatatcggctggtttggtgtcttgtcg
attcctaccttgctagctgctaccacctgttttgttttggcttttattgctgcgcctagc
gtagatatggatggtatacgtgagccaattatgggttcactaatggacggtaataattta
attacagccgcagtagtgccgacttctgctgcgattggtttgcacttttatcctatctgg
gaagcggcatcaatggatgaatggctttacaatggcgggccatatcagttgattgtgctg
cattttctgattggtatttggtgcttactagggcgattttgggaacttagttatcgttta
ggaatgcgaccttggatagcagttgcctattctgcacctgtgattgctgctacttccgtt
ttgttagtttatcctattggtcaaggtagtttttctgatggtttacctttgggaattgct
ggaactttccactttatgttggctttccaaggcgatcataatatcctgatgcacccgttc
catatgttgggtgtagcaggtgtatttggtggcgcactgttgagttctttgcatggttct
ttagtggcttcaacgctaattcgcaataccgatgaaaatgaatccatcaatggtggatat
aagctgggtcagcagcaagtaacatacaaatacttggcaggacacaatagcttcttggga
cgcttgttgattcctacctttgctagcagaaatcatcgtgctttccatttcttattagca
gcattaccaacaataggtatttggtttgcggcgatgggtgtatgttcaatggcatttaat
ctcaatggcttgaactttaatcattccatcttagatagtcggggtaatgtaattagaagc
gacgctgatatcttaaaccgtgccaatattggtctcagtgtcatgcacgctcctaatgtc
cataattttccattggtgctgtctagcggtcaacctattccagttagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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