KEGG   Allorhizobium ampelinum: Avi_0423
Entry
Avi_0423          CDS       T00851                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS family
  KO
K03555  DNA mismatch repair protein MutS
Organism
avi  Allorhizobium ampelinum
Pathway
avi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:avi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Avi_0423 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avi03400]
    Avi_0423 (mutS)
DNA repair and recombination proteins [BR:avi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Avi_0423 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV YmaF
Other DBs
NCBI-ProteinID: ACM35293
UniProt: B9JZI1
Position
1:359072..361723
AA seq 883 aa
MMEQYIEIKANNPGSLLFYRMGDFYELFFEDAVEASRALGITLTKRGQHLGQDIPMCGVP
VHASDDYLQKLITLGFRVAVCEQVEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP
SETNYLMALARVRGSGDELALAWIDISTGVFRLAETNPTRLLADIFRIDPREVIVAETLM
QDPDLKPAFDVLGRVVVPQPSVLFDSASAEGRITRYFNVKTLDGFGGFSRPEMAAASAAI
AYVEKTQMSERPPLGLPERQSSSSTLFIDAATRANLELVKTLSGQKQGSLLNTIDRTVTG
GGARLMAERLMSPLTEVVAIAQRQDAVAYLLTDGFLCERLRDLLKRAPDMPRALSRLALD
RGGPRDLAAIRYGLSTSGDVAGLLRGAVLPDELASALTDLEMLSPSLENLLASQLAEDLP
LLKRDGGFLREGADEGLDEVRALRDQSRRVIAGLQLQYAEETGVKSLKIKHNNVLGYFIE
VTAGNAGPLIEGEAKARFIHRQSMANAMRFTTTELADLESRIANAAGQALEIELAAFERM
RQAVVTEAEAIKKAARALAVIDVAAGLAVLAEEQGYCRPLVDDSRMFSIVAGRHPVVEQA
LRKQAASPFIANNCDLSPVGDQKHGAIWMLTGPNMGGKSTFLRQNALIAILAQMGSFVPA
GSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQAGERSLVILDEIGRGTATF
DGLSIAWATVEHLHEVNRCRSLFATHFHELTALSEKLVRLSNVTMKVKEWHGDVIFLHEV
GAGAADRSYGIQVARLAGLPGMVVERARAVLSQLEDADRKNPASQLIDDLPLFQVSQRRE
SRTGTGAQVSAVEEALRSLNLDDLTPRQAMDALYDLKTTLAKS
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgatggaacagtatattgaaatcaaggcgaacaatcccggttcgctgctgttttaccgg
atgggcgatttctatgagctgtttttcgaggacgccgtcgaggcgtcccgggcgctcggc
atcaccctgaccaagcgcgggcagcatctgggtcaagacattccgatgtgcggtgtccct
gtacatgcctctgacgattatctgcaaaagctgatcacgctcgggttccgtgtcgccgtt
tgcgaacaggtggaagacccggctgaggcaaagaagcgcggctccaaatccgtggtcaag
cgtgacgtggtacgtctggtcacgcccggaacgctgacggaagaaaagctgctgtcgccg
tcggagaccaattatctgatggcgctggcacgggtgcgcggcagcggcgatgaactggcg
ctggcctggatcgatatttccaccggcgttttccgtctggcagaaaccaatcccacccgt
ctgctggcggatattttccgcatcgatccgcgtgaagtgatcgtcgccgaaaccctgatg
caggacccggacctcaagccggccttcgatgtgcttggccgcgtggtcgtgccgcagcca
tcggtgctgttcgatagcgcttcggcggaggggcgcatcacgcgctatttcaacgtcaag
acgctcgatggtttcggcgggttttcacggccggaaatggccgcggcttcggcggcgatt
gcctatgtggaaaaaacccagatgtccgagcgtccgccgcttgggttgcctgagcggcaa
tcctcgtcctcgacgctgtttattgacgcggccacccgcgccaatctggaattggtgaag
accctttccggccagaaacagggttccctgctcaacaccattgaccgaaccgtaaccggg
ggcggcgcgcggctgatggccgaacggctgatgtcgcctttgacggaggttgtggcaatt
gcgcagcggcaggatgcggttgcctatctgttgacggacggttttctgtgtgaacggctg
cgcgaccttttgaaacgtgccccggatatgccgcgtgccctgtcgcggctggcgctggac
cggggcgggccaagagatctggcggcgatccggtatgggttgtccacatcaggcgatgtg
gctgggttgctgcggggggctgtcctgccggatgagcttgcctcggcgctcactgatctc
gaaatgctgtcgccgtcgctcgaaaatctgctggcctcgcaactggcggaagatctgcca
ttgttgaaacgcgatggcgggtttttgagagagggcgccgatgaggggctggacgaggtg
cgggcgctgcgtgaccagtcgcgccgggtgatcgccgggctgcaattgcaatatgccgag
gaaaccggtgtcaagtcgctgaagatcaagcataacaatgtgctgggctatttcatcgaa
gtcaccgccggcaatgccgggccgctgatcgagggtgaggcgaaggcccgctttatccat
cgccagtcgatggccaatgccatgcgctttaccacgaccgaactggctgatcttgaaagc
cggattgccaatgcggcgggacaggcgctggaaatcgagcttgcggcgtttgagcgaatg
cgccaggcggtggtgaccgaggccgaggccatcaagaaagcggcgcgggcgctggcggtg
atcgatgtggccgccggtcttgccgtgctggccgaggagcagggctattgccggcccctg
gtcgatgacagcaggatgttttccattgtcgccgggcgtcatcccgtggtcgagcaggcc
ttgcgcaaacaggcggccagccctttcattgccaataattgcgatctttcaccggtaggc
gatcagaagcacggggcgatctggatgctgaccggtccgaacatgggcggtaaatccacc
tttctgcgccagaatgcgctgatcgccattctcgcccagatggggtcgttcgtgcccgcc
gggtcggcgcatatcggcattgtcgatcggctgttttcccgcgttggcgcctccgacgat
ctggcgcggggccgttcgaccttcatggtcgagatggtagagacggcggccattctcaat
caggcgggcgagcggtctctggtcattctcgatgagattggccgtggtacggcgacgttc
gacggcctgtcgattgcctgggcgactgtcgagcatctgcatgaggtcaatcgctgccgg
tcgttgtttgccacgcattttcacgagttgacggcgctgtctgaaaagcttgtccggctg
tcgaacgtcactatgaaagtcaaggaatggcacggcgacgtgattttcctgcatgaggtt
ggggccggtgccgctgaccgttcctacggcatccaggtggcgcgactggccgggctgccg
ggcatggtggtggagcgcgcccgcgccgtgttgtcgcagctcgaagatgccgatcgcaaa
aatccggccagccagttgattgacgacctgccactgttccaggtcagtcagaggcgggag
agccggacggggacaggggcgcaggtgtcggcggtggaagaggcattgcgcagcctcaat
ctcgatgacttgacgccaaggcaagcgatggatgcgctctacgatctgaaaaccactctg
gcgaaatcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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