KEGG   Allorhizobium ampelinum: Avi_1631
Entry
Avi_1631          CDS       T00851                                 
Symbol
ihfA
Name
(GenBank) integration host factor alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
avi  Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:avi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avi03032]
    Avi_1631 (ihfA)
   03036 Chromosome and associated proteins [BR:avi03036]
    Avi_1631 (ihfA)
   03400 DNA repair and recombination proteins [BR:avi03400]
    Avi_1631 (ihfA)
DNA replication proteins [BR:avi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Avi_1631 (ihfA)
Chromosome and associated proteins [BR:avi03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Avi_1631 (ihfA)
DNA repair and recombination proteins [BR:avi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Avi_1631 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG NMT1_2
Other DBs
NCBI-ProteinID: ACM36168
UniProt: B9JV88
Position
1:1363966..1364304
AA seq 112 aa
MAGKTVTRADLAESVFRKVGLSRTESAELVETVIDEICNAIVRGEMVKLSSFATFQVRAK
NERIGRNPKTGEEVPISPRKVMTFKASNVLKQRILRSHLARKAKQKPANPAA
NT seq 339 nt   +upstreamnt  +downstreamnt
atggctggcaaaacggtaacacgcgcggatttggctgagtcggtcttccgcaaggttggt
ctctcccggacagaatccgccgagcttgtcgaaactgttatcgatgagatttgcaatgcc
atcgtgcgtggcgaaatggtcaagctttcctctttcgccacctttcaggtgcgcgccaag
aatgagcggatcggccgcaacccgaagaccggcgaagaagtgccgatttcgccccgcaag
gtgatgacgttcaaagcctccaacgtgttgaaacagcgtatcctgcgctcgcatctggcc
cgcaaagccaagcagaaaccggccaatccggctgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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