KEGG   Allorhizobium ampelinum: Avi_4020
Entry
Avi_4020          CDS       T00851                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
avi  Allorhizobium ampelinum
Pathway
avi00300  Lysine biosynthesis
avi00470  D-Amino acid metabolism
avi01100  Metabolic pathways
avi01110  Biosynthesis of secondary metabolites
avi01120  Microbial metabolism in diverse environments
avi01230  Biosynthesis of amino acids
Module
avi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:avi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Avi_4020 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Avi_4020 (lysA)
Enzymes [BR:avi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Avi_4020 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ACM37902
UniProt: B9JTJ4
Position
1:3384158..3385429
AA seq 423 aa
MNHFQYRDGILHAEDVSVPDIAKAVGTPFYCYSTATLERHYRVFSEAFDGVDSMVCYAVK
ANSNQAVLKTLGQLGAGVDVVSEGELRRALAAGIPPSRILFSGVGKTPSEMDLGLEVGIY
CFNVESEPELDVLNQRALKAGKTAHVSFRINPDVDAGTHAKISTGRKENKFGISYERARA
VYARAASLEGIKVTGIDMHIGSQITDLQPFAEAFKLLRDLVTTLRAEGHTIDHVDVGGGL
GIPYKDDNNPPPDPAAYAAIVKQQLASLDCRIVAEPGRLIVGNAGILVTEVIYVKDGGNK
TFVIVDAAMNDLIRPTLYDAHHELRPVLLSAASAPRIRADVVGPVCETGDYLALDREMSM
PRPGDLIAIGSAGAYGAVQSSTYNTRRLVPEVLVKGDQFHVIRPRPSYEDMIRLDSLPDW
LAS
NT seq 1272 nt   +upstreamnt  +downstreamnt
gtgaaccatttccagtatcgcgatggcattctccatgccgaggatgtgtccgttccagac
atcgccaaggcggtcggcacccccttctactgctactccaccgcaacgctggagcgccat
taccgggtgttttccgaggccttcgacggcgtcgattccatggtctgctacgcggtcaaa
gccaattccaaccaggcggtgctgaaaacccttgggcaattgggtgctggcgtcgatgtg
gtctccgaaggcgaattgcgccgggcgctggcagctggcattccccccagtcgcatcctg
ttttcaggcgtcggcaagaccccgtcggaaatggatctcgggttggaggtcgggatttac
tgtttcaatgtcgaatccgaaccggaactggacgtcctcaatcaaagagcgctgaaagcc
ggtaaaacggcgcatgtctccttccgcatcaacccggatgttgatgctggcacccatgcg
aagatttccaccggtcggaaagaaaacaaattcggcatttcctatgagcgcgcccgcgcc
gtctatgcccgcgccgccagccttgaaggtatcaaggtcaccggtatcgacatgcatatc
ggcagccagatcaccgatctccagccatttgccgaggccttcaagctgctgcgcgacctg
gtgaccacgctgcgggccgaaggccacactatcgatcacgtcgatgtcggcggtgggctt
gggattccctacaaagacgacaacaatccgccgcccgacccggcagcctatgcagccatc
gtcaagcagcaattggcctcgctggactgccggatcgtcgccgagccgggccggctgatc
gttggcaatgccggtattctcgtcaccgaagtgatctatgtgaaggacggtggcaacaag
accttcgtcatcgtcgatgccgccatgaacgacctgatccgcccgacgctctatgacgcc
catcacgagcttcgtccggtgctgctgtctgcggccagcgccccgcgcatccgcgccgat
gtggtcgggccggtctgcgagaccggcgattatctggcgctcgaccgcgaaatgagcatg
ccaaggcccggcgacctgatcgccatcggctcggcaggggcctacggcgctgttcaatcg
agcacgtataatacgagacgactggtgcccgaagtgctcgtcaagggcgaccaattccac
gtgatccggccaaggccgagctatgaggatatgatccggttggacagcctgcccgattgg
ctggcatcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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