KEGG   Agrobacterium vitis: Avi_5648Help
Entry
Avi_5648          CDS       T00851                                 

Gene name
gatA
Definition
(GenBank) glutamyl-tRNA amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
avi  Agrobacterium vitis
Pathway
avi00970  Aminoacyl-tRNA biosynthesis
avi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:avi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Avi_5648 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:avi03029]
    Avi_5648 (gatA)
Enzymes [BR:avi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Avi_5648 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Avi_5648 (gatA)
Mitochondrial biogenesis [BR:avi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Avi_5648 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase
Motif
Other DBs
NCBI-ProteinID: ACM38735
UniProt: B9K1I7
Position
2:671716..673110
Genome map
AA seq 464 aa AA seqDB search
MTDLVDLTIRELIAAFSAKTLSPEDYWNAVEARIDAFEPSVQALYLYDSESARAQARAST
DRWQRGAALGPLDGIPVSLKELIATRGQPVPLGTAAVDLVPAAADAPIAARMREDGAVIF
AKTTCPDYGMLSSGLSSFHPLSRNPWDLSQNPGGSSAGAAAAGAAGFGPLHIGTDIGGSV
RLPAGWTGLFGFKPSHGRIPVDPYYVGRCAGPMTRCVDDAAYSMITLARPDWRDGTSLPP
ETINWLDEDIDISGMKIGVMLDAGCGLAAEPEVREAIIAAAKRFEAAGAEVFEVGPVMNR
AMLDGLDVFWRAKFWGDIAALSTEKRQMILPYIYEWAEGGANVSGVDAVKGFGQTIEMRK
TCGALFTRVDAVLSPVNPVVSYPAEWASPTNDPQKPFEHIAFTVPWNMSEQPAASINCGF
SNSGMPIGLQIVGPRFGDLTVLKLSKLFESWTGRINTWPQPPRS
NT seq 1395 nt NT seq  +upstreamnt  +downstreamnt
atgaccgatcttgttgatttgaccatccgggagcttattgccgctttcagcgccaagacc
ctgtcgccggaagactattggaacgcggttgaggcccggatcgatgctttcgagccctcg
gttcaggcgctttacctctacgattccgaaagcgcccgtgcccaggcccgcgcctcgacg
gatcgctggcagcgcggcgcggccctcggcccgctcgatggcattcctgtctcgctgaag
gagctgatcgctaccagaggccagccggtgccgctcggcactgccgccgttgatctcgtg
cctgctgcggcggacgcgccgattgcggcacggatgcgcgaagacggcgcggtgattttc
gccaagaccacctgcccggattatggaatgttgtcttcgggcctgtcgagctttcatccg
ctcagccgcaatccctgggatctcagccaaaaccccggcggctccagtgccggtgcggca
gcggcaggggctgccgggttcggaccgctgcatatcggcacggatattggcggctctgtg
cgcctgcccgccgggtggaccgggctgttcggcttcaagcccagccatggccgcatccct
gttgatccctattatgtcgggcgttgcgccgggccaatgacccgctgcgtcgatgatgcc
gcctactcgatgataaccttggcccgcccggactggcgtgacgggaccagtcttccccca
gagacgatcaactggctggatgaggatatcgatatcagcggcatgaaaatcggtgtcatg
ttggacgctggctgcggtcttgcagctgaaccagaggtgcgcgaggcaattattgctgcc
gctaagcgctttgaggcggcaggggccgaggttttcgaggttggcccggtgatgaaccgc
gccatgctggatgggctggacgtgttctggcgagcaaaattctggggtgatattgccgcc
ctcagcacggaaaagcgccagatgatcctgccctatatctatgaatgggccgagggcggt
gccaatgtcagtggcgtcgatgcggtcaagggctttggccagaccatcgagatgcgcaag
acctgcggcgcgttgtttacccgcgttgatgcggttctatcgccggtcaatcctgtcgtt
tcctatccggcggaatgggcctcgccaaccaatgatccgcagaagcctttcgagcatatt
gccttcacggtgccgtggaacatgtcggaacagccagcagcatcgatcaattgcggcttt
tcaaacagcggcatgccgattggcttgcagatcgtcggcccacggtttggtgatctgacc
gtgctgaaactgtcgaaactgtttgaaagctggaccgggcggatcaacacttggccgcag
ccgccacggtcttga

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