KEGG   Allorhizobium ampelinum: Avi_8333
Entry
Avi_8333          CDS       T00851                                 
Symbol
trbC
Name
(GenBank) conjugal transfer protein
  KO
K20528  type IV secretion system protein TrbC
Organism
avi  Allorhizobium ampelinum
Pathway
avi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:avi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Avi_8333 (trbC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avi02044]
    Avi_8333 (trbC)
Secretion system [BR:avi02044]
 Type IV secretion system
  Trb secretion system protein
   Avi_8333 (trbC)
SSDB
Motif
Pfam: TrbC
Other DBs
NCBI-ProteinID: ACM39743
UniProt: B9K489
Position
pTiS4:complement(256509..256913)
AA seq 134 aa
MSRKTHLILTVTALALVSLGSLDGALASSGGGSLPWESPLQQIQQSITGPVAGFIALAAV
AIAGAMLIFGGELNDFARRLCYVALVGGVLLGATQIVALFGATGASIGELHSQAGPFDYS
PSATLIERGEGNRG
NT seq 405 nt   +upstreamnt  +downstreamnt
atgtcgcgtaagacccatcttatcctcacagtcacagcactggccctcgtctcgctcggc
tcccttgatggggcactggcatcttccggtggcggcagccttccctgggaatccccactc
cagcagatccagcagtcgattaccggtcccgtggccggcttcatcgcacttgcggccgtc
gccatcgccggtgcgatgctgatcttcggcggggagctgaacgactttgcccgacggctt
tgctacgtcgcgctggtcggtggcgtgcttctcggcgccacccagatcgtcgccctgttt
ggcgcgacaggggcgtcgatcggcgagcttcattcgcaggctggcccgttcgattattcc
ccctccgccacgctcattgaaagaggggaggggaatcgtggctga

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