KEGG   Azotobacter vinelandii CA: AvCA_20610
Entry
AvCA_20610        CDS       T02633                                 
Symbol
xseB-2
Name
(GenBank) exodeoxyribonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
avl  Azotobacter vinelandii CA
Pathway
avl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:avl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AvCA_20610 (xseB-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avl03400]
    AvCA_20610 (xseB-2)
Enzymes [BR:avl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     AvCA_20610 (xseB-2)
DNA repair and recombination proteins [BR:avl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AvCA_20610 (xseB-2)
SSDB
Motif
Pfam: Exonuc_VII_S Phage_TAC_11 MTBP_N
Other DBs
NCBI-ProteinID: AGK12540
Position
complement(2051794..2052036)
AA seq 80 aa
MARKKAAVDFEQSLAELHQLVERLEAGELSLEDSLACFEQGIRLTRDCQAALGRAEQKVQ
ILLAHGGTLETAPFDADAQP
NT seq 243 nt   +upstreamnt  +downstreamnt
atggcccgcaagaaagctgccgtcgatttcgagcaatccctcgccgaactgcaccaactg
gtcgagcgcctggaggccggcgagctgtcgctggaagactccctggcctgcttcgagcag
ggcatccgcctgacccgcgactgccaggccgcgctgggccgggccgaacagaaggtgcag
atcctcctggcgcatggcggcacactcgaaacggcccccttcgacgcggacgcccagcca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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