KEGG   Azotobacter vinelandii DJ: Avin_51710
Entry
Avin_51710        CDS       T00885                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
avn  Azotobacter vinelandii DJ
Pathway
avn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:avn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Avin_51710 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avn03400]
    Avin_51710 (recB)
Enzymes [BR:avn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Avin_51710 (recB)
DNA repair and recombination proteins [BR:avn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Avin_51710 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 AAA_25 PDDEXK_1 AAA_11 AAA_30
Other DBs
NCBI-ProteinID: ACO81248
UniProt: C1DMH1
Position
complement(5261178..5264858)
AA seq 1226 aa
MSQPPTAERPLALRFPLHGSRLIEASAGTGKTFTISALYLRLVLGHGGEAGFSRELLPPE
ILVVTFTDAATRELRDRIRARLVEAAKVFREEAPGDGLLRQLRADFSAERWPACARRLDI
AAQWMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHGELLAEVVRDYWRQHCYPLS
AAALGWVMEHWGHPDALLKDKLGPLLGEAQPLPAEPLGALLERALAEQAGELARLKEGWN
AWADELEALLDAAVQAKRVDGRKIQARYYRPWCEKLRAWAVGDGTDLDLGSGFARLTPEG
LAEAWKGESPRHPALEAMRALPARLRTLSGPDEPARRHAAAWVSLRFEQEKRRRAEMGFD
DMLSRLDAALRGDNGGRLAELIRGQFPVALIDEFQDTDPLQYRIFDRIYAIASNRADCGL
FLIGDPKQAIYAFRGADIHTYLRARQATEGRHYNLETNFRSSQALVSAVNRVFRLAERRE
AGHGAFLFRDGTTNPLPFLEVGAQGREEVWQIGGNAQPALNLWHLEDEAPLPGGAYRAQM
AERAASEIVRLLNLGQRGGAGFVRDGRLQPLRPSDIAILVRDFKEAEAIRGQLAARGVRS
VYLSDKDSVFASPEARDLLLWLRACAEPDVDRPLRAALASRSLGLALAELEELNRDERIW
ERRVMQFRGYRQRWQRQGVLPMLHQLLHDFDLPQRLMARPDGERALTNLLHLAELLQRAA
AGLDGEQALIRHLSELLAGEIQVAEEQVLRLESDAALVRVVTIHKSKGLEYPLVFLPFVC
AFRAVEGGRPLWVYDGERRRLVLTPGEDEVARADRERLGEELRLLYVALTRARHACWLGV
ADLCVGNARKSRLHDSALGYLLGGAVPLERSAALADWLAPLDVAGESAVLEAPEASGERF
VEQAVARSKPQWRTPARSAAEHWWIASYSALRIGAGEERLADSQIPASRFDDAAPDSPAA
QKVADDERESVFVPLRAGETPTLHRFPRGPNPGTFLHGLLEMAGREGFAALAAEPARLRE
LIARRCQLRGMTEWIDPLADWLLDLLTRPLALGGDRCVALVGLGQYQPELEFWFEARAVD
VRRIDELVQERVLPGLSRPALAKDRLNGMFKGFIDLAFEHGGRYYLLDYKSNWLGEGDAA
YSAEAMAATAASHRYDLQSVLYLLALHRQLRARLPGYDYDAHLGGALCLFLRGSRAAGQG
IHWVRPPRELIETLDALFEGKKEAEA
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgagccagccgccgaccgccgagcgcccgctggcgctacgcttcccgctgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagaccttcaccatctccgccctttacctg
cgcctggtgctcggccatggcggcgaggcgggcttttcccgcgagttgctgccgccggag
atcctcgtggtgaccttcaccgacgccgccacccgcgagctgcgcgaccgcatccgcgcg
cggctggtcgaggcggccaaggtgtttcgcgaggaggcgccgggcgacggtctgctgcgg
cagttgcgcgccgacttttccgccgagcgctggccggcctgcgcgcgccgcctggacatc
gccgcgcagtggatggacgaagcggcggtgtcgaccattcacggctggtgccagcgcatg
ctgcgcgagcacgccttcgacagcggcagcctgttcacccagaccctggagaccgaccac
ggcgaactgctcgccgaggtggtgcgcgactactggcgccagcactgctacccgctctcc
gctgcggcgctgggctgggtgatggagcactgggggcatccggatgcgctgctcaaggac
aagctgggcccgctgctcggcgaggcgcagccgctgccggccgagccgctcggtgcgctg
ctggagcgggcgctggccgagcaggccggcgaactggcccggctgaaggaaggctggaac
gcctgggccgacgagctggaagcgttgctcgatgcggcggtgcaggccaaacgggtggac
ggacgcaagatccaggcgcgctactaccggccctggtgcgagaagttgcgcgcctgggcc
gttggcgacgggacggacctcgacctcggcagcggcttcgcccgcctgacccccgagggc
ctggccgaggcctggaagggcgagtcgccgcgccatccggcgttggaggccatgcgcgcg
ctgccggcgcgcctgaggacgctgtccggccccgacgagccggcccggcgccatgccgcc
gcctgggtaagcctgcgcttcgagcaggaaaagcgccggcgcgccgaaatgggtttcgac
gacatgctgagccgcctcgacgccgccctgcggggcgacaacggcgggcgcctggccgag
ctgatccgtggccagttcccggtggcgctgatcgacgagttccaggacaccgacccgctg
cagtaccgcatcttcgaccgcatctacgccatcgcgagcaaccgcgccgactgcggcctg
ttcctgatcggcgaccccaagcaggcgatctacgccttccgcggcgccgatatccatacc
tacctgcgcgcccgccaggccaccgagggccgccactacaacctggaaaccaacttccgc
tccagccaggcgctggtttccgcggtcaatcgggtattccgcctggccgagcggcgcgaa
gccgggcacggcgccttcctgttccgcgacggcacgaccaacccgctgccctttctcgaa
gtgggcgcgcagggccgcgaagaggtctggcagatcgggggcaatgcgcagccggcactg
aatctctggcatctggaggacgaggcgccgctgcccggcggcgcctaccgcgcgcagatg
gccgaacgcgccgccagcgagatcgtccgcctgctgaacctcggccagcggggcggggcg
ggcttcgtccgggacgggcggctgcagccgctgcgccccagcgatatcgccattctggtg
cgcgacttcaaggaggccgaggcgatccgtggccaactggccgctcgcggggtacgcagc
gtctacctgtcggacaaggattcggtgttcgccagccccgaggcgcgcgacctcctgctg
tggctgcgcgcctgcgccgaaccggacgtcgaccgcccgctgcgcgccgccctggccagc
cgcagcctgggcctcgcgctggccgagctggaggaactgaaccgcgacgagcgcatctgg
gagaggcgcgtcatgcagttccgcggctaccgccagcgctggcagcgccagggcgtgctg
ccgatgctgcaccaactgctgcacgacttcgatctgccgcagcggctgatggcgcgcccc
gacggcgagcgcgcgctgaccaacctgctgcatctggccgagctgctgcagcgtgccgcc
gccgggctggacggcgagcaggcgctgatccgccatctgtccgagctgctggccggcgag
atccaggtcgccgaggagcaggtgctgcgcctggagagcgacgcggcgctggtgcgggtg
gtgaccatccacaaatccaagggtctggagtatccgctggtgttcctgccgttcgtctgc
gccttccgcgcggtggagggcggcaggccgctgtgggtgtacgacggcgagcgccgccgg
ctggtgctgacgccgggcgaggacgaggtggcgcgtgccgaccgcgagcgcctgggcgag
gaactgcgcctgctctacgtggctctgacccgcgcccgccacgcctgctggctgggcgtc
gccgacctctgcgtcggcaatgccagaaaatcgcgcctgcacgactcggcgctcggctat
ctgctcggcggcgctgtgccgctggagcgcagcgccgccctggccgactggctcgcgccg
ctggacgtggcgggtgagagcgcggtgctggaggcgcccgaagccagcggcgagcgcttc
gtcgagcaggccgtcgcccggagcaagccgcaatggcgcaccccggcgcgcagcgccgcc
gagcactggtggatcgcctcctacagcgccctgcgcatcggcgccggcgaggaaaggctg
gccgacagccagataccggccagccgcttcgacgacgccgcgccggacagcccggcggca
cagaaggtcgccgacgacgagcgcgagagcgtcttcgtgccgctgcgcgcgggcgaaacg
ccgaccctgcatcgttttccgcgcggccccaatcccggcaccttcctccacggcctgctg
gaaatggccggccgcgagggcttcgccgcgctggccgccgagcccgcgcggctgcgcgag
ctgatcgcccggcgctgccagttgcgtggcatgaccgagtggatcgatccgctggccgac
tggctgctcgacctgctgaccaggcccctggcgctcggcggggaccggtgcgtggcgctg
gtcgggctcggccagtaccagcccgaactggagttctggttcgaggcgcgcgccgtcgac
gtgcgccgcatcgacgaactggtccaggagcgggtgctgcccggcctgtcgcgtccggca
ctggcgaaggaccggctcaacggcatgttcaagggcttcatcgacctggcgttcgagcac
ggcgggcgctactacctgctcgactacaagtccaactggctgggcgagggcgatgccgcc
tacagcgccgaggcgatggcggcgaccgccgccagccaccgctacgacctacagtcggtg
ctctacctgctggccctgcaccgccagttgcgggcgcgcctgcccggctacgactacgac
gcgcacctgggcggcgcgctctgcctgttcctgcgcggcagccgcgcggcggggcagggc
atccattgggtgcgcccgccacgcgagctgatcgagacgctggatgcgctgttcgagggc
aagaaggaggccgaggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (71)   

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