KEGG   Aeromonas veronii TH0426: AMS64_04425
Entry
AMS64_04425       CDS       T04529                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
avo  Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:avo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:avo03016]
    AMS64_04425
Enzymes [BR:avo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AMS64_04425
Transfer RNA biogenesis [BR:avo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AMS64_04425
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1
Other DBs
NCBI-ProteinID: AMQ41684
UniProt: A0A2S3XNQ0
Position
complement(934676..936712)
AA seq 678 aa
MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
TALIRTEKEKEVAEPDTLLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEIIQKIAAQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRRDLTKVPFFTIDGAKTKDMDDALAITKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARICSHARLNYDDVSDWAEHGKELSIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFERDEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSSE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSTELTEHLTACRRLHR
MVERDIGDWLYVRYLKAAAGTDQVFNAEIIDVMRAGLKLRLQENGAVVFLPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPEAPAAE
SAPADSSETPAEAAPKAE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccg
aagaaagagggtgttatccgcgcctccgatcggggcttcggctttctggaagtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
accgccctgatccgcaccgaaaaagagaaggaagtggccgagccggataccctgctggag
cagtccgtcacccgcttcgtggcccgggtcaagatgttccgcgaccgcctcaacgtggtg
gccgaccatccgctgatcaaggatgccatcaaggcccgcgtcaagaagggtctggatgag
aaagagttcaaggaaggtgactgggtggtggctaccctcaagcgccatgcgctggtcgac
ggcaacttctctgccgagatcatccagaagatcgccgcccaggaagatcacaatgtgccc
tggtgggtggtgctggcgcgccacaatctggcccaggtcgagccggctgatttgccggag
tggaaggtgatcgaagaggaagagctgccccgtcgcgatctgaccaaggtgcccttcttc
accatcgacggtgccaaaaccaaggatatggacgatgcgctggccatcaccaagctggat
aacggctgggagctgctggtcgccatcgctgacccgaccgcctatgtggccgaagggagc
gagctggacaaagaggccgcccagcgcgcctttaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacactctgtgcgcccgtctgctcatcgccgaagatggtctgctactggaggagaccgag
ttcttcgccgcccgcatctgctcccacgcccgtctcaactatgacgacgtctccgactgg
gccgagcatggcaaagagctgtctatcgacgcaggcgtactggcccagctgccgctgatg
aaggcgatgaccgaagcacgcatcgcgtggcgcaccgagcatgcgctggtattcccggat
cgtcccgactacgacttcgagctgggcgagaatggcgaagtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggtcgcgtgctgggcaagagcgtcggttacggcatcttcaacgttcacaccggctttgac
gaagagtctctcgacggtgccatcgacctgctgaagagtgccgaagccccgttcgagcgc
gacgagatcgccagcctctccggcttctgcgccctgcgtcgctggatcgacaacctcgac
acccgctggctggatggcaagatccgccgtttccagagctatgcgctgatgtcctccgag
ccgggcgcccactacggcctgggtctggatgcctacgccacctggacctccccgatccgt
aaatacggcgatatggtcaaccatcgtctgctcaaagcggtcatcgccggcaagaccccg
ggtgagcgcccgagcaccgagctcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgttacctgaaagcagccgctggc
accgatcaggtgttcaacgccgagatcatcgacgtgatgcgtgccggtctcaagctgcgt
ctgcaggaaaacggagcagtggtcttcctgcctgcccgtcacatcctcgacaacaaggat
cgactggagtgcaactgggacaatggccgcgtctatctggacaagaccgaagtggtttat
gagctcggccagatcatcgaggtgaagctgaccgaagcggtggaagagacccgctccctt
atcgccaagccggcggtggagttggtgccgggcccggcaccggaagccccggcggccgag
agtgcgccagccgatagcagtgaaacgcccgctgaggctgcccccaaggcggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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