KEGG   Aeromonas veronii B565: B565_1186
Entry
B565_1186         CDS       T01462                                 
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
avr  Aeromonas veronii B565
Pathway
avr00630  Glyoxylate and dicarboxylate metabolism
avr00680  Methane metabolism
avr01100  Metabolic pathways
avr01120  Microbial metabolism in diverse environments
avr01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:avr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    B565_1186
  09102 Energy metabolism
   00680 Methane metabolism
    B565_1186
Enzymes [BR:avr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     B565_1186
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Pyr_redox_2 Fer4_20 Molybdop_Fe4S4 Fer2_4 Fer4_7 Pyr_redox Fer4 NAD_binding_8 Pyr_redox_3 Fer4_6 Fer4_9 Fer4_8 Fer4_10 Fer4_21 Fer4_2 DAO Fer4_15 Thi4 Fer4_16 HI0933_like Fer4_18 FAD_oxidored NAD_binding_7 Fer4_3 Lys_Orn_oxgnase AlaDh_PNT_C FAD_binding_2 Fer4_22 Amino_oxidase FAD_binding_3 Fer4_4
Other DBs
NCBI-ProteinID: AEB49221
Position
complement(1305037..1309227)
AA seq 1396 aa
MITITLDGAQLTVDPTRTLLQIAKQHQTDIPSLCGDNTSGPQTPCDLCVVEIAGLGIRRA
CETRPEAGMVITTKSEDLSTHRQQALGRILADHYADCEAPCQRACPAGVDIQSYLHHIAM
GDHEAAMAVIKQTLPMPLSIGRVCPAFCEAECRRALVDEPLAIRQLKRHAADRDLAEIAP
YQPAKKPAKGKRVAIIGSGPGGLTCGYYLGYEGFEVDLFEAMPEAGGWLRYGIPEYRLPK
AILDQEIALMCQSGMRIHTKQRLGHQLTLSALCRDYDAVCLAVGASKAVPMDYPGSTLAG
CYLGVDYLKDRMLAKRLTTGKRVAVIGGGNTAIDCARTAVRLGAETTLIYRRTRAEMPAE
AYEIDEAEHEGVRFLMLTNPVENLPDSCGRVCQVRLERMALGEPDASGRRRPEPTGELFL
EEFDTVIAAVSQQPDLSFMEGEPLTLPFTRWQTLESHPETMHSGHGNLFAIGDLRRGPAT
AIEAVADGRKAALAIDQFLHGDMVDPVRPFNACKAPTLKQVDPAQFAHLKKVARTIMPHL
AEKDREGSFAEVERGLSDADARSEASRCLECGCQANTDCALRDYATEYKVEQSALDTSQC
QKFAVDNSSEFIVFDANRCIGCGQCVQTCGEQAVQGVLRFAKNSDGTLSNRPQFDTGLSM
GDSHCVQCGACVQVCPTGALVDARDKSQGRTELLTPVNTICTYCGVGCGVTLYVDEERNR
IRYVEGNRNSPVNQGLLCVKGRFGFDFIQSEERLTTPLVRKNGELVPASWQEAIALVAER
FTALRQHYGSDALAGFSSAKTTNEENYLFQKFMRRELGTNNVDHCARLCHASTVTGLEAS
LGSGAMTNDIPSIDHSDLIFIIGSDTSAAHPIIGSHIKRAVTMGKARLVVADPKRIEMAD
HASLYLAHRPGTDVMLLNGLMQQIIQNNWHDKAYIADRVEGFEALQAEVLSPAYAPDKVA
LVTGVPAEQVIELARLIGTAEHTAVYYSMGITQHTTGHDNVRAIANLQLLCGNIGIEGGG
INPLRGQSNVQGACDMGALPNCLPGYQKVANPEVHARFVAAWQQPDLPRTPGLTLTETID
AACAGSIKGLYVMGENPVLSDPDQHHVIEGLKQLEFLVVQDIFLSETAQLADVVLPSSSF
AEKSGHFTNTERRVQRISPALNAPGDAREDWWIIQQIANAMGGDWRYQHPKEITAEICQV
TPQYAGIQWDKVGAQGLQWPSNDAAPEGTRLLHSKQFTRGKGEMVATPFRYAAELPDETY
PIVLTTGRLLEQFHTGTMTRKTKGLDKLAGPRVMMSVVDAERLGISNSERVKVTSRRGHI
ELPTFVTKRMQPGVVFIPFHFAEAPANRLTINATDPHAKIPEFKVAAVRIDKLESPSQTG
VLSMQKEPAKPDIEVP
NT seq 4191 nt   +upstreamnt  +downstreamnt
atgatcaccatcaccctcgatggggctcagttgacggttgacccgaccagaaccctgctc
cagatagccaaacagcaccagactgatatcccctccctgtgcggtgacaacaccagcggc
ccccaaacaccctgcgatctctgcgtggtagagattgccggtctcggcatccgccgcgcc
tgcgagacgcgccccgaggcagggatggtgatcacgaccaaaagcgaggacctgagcacc
caccgccagcaggcgctcggccgcatcctcgcagatcactacgccgattgcgaagccccc
tgccagcgcgcctgtccggccggggtggacattcaatcctatctgcaccatatcgccatg
ggggatcacgaagcggcgatggccgtcatcaagcagaccctgccaatgcccctctccatc
ggccgggtctgccctgctttctgtgaggcggagtgccgccgcgcgctggtggatgaaccg
ctggctattcgtcagctcaagcgccatgccgccgatcgcgatctggccgagattgccccc
tatcaaccagccaagaagcccgccaagggcaagcgggtggccattatcggcagcggcccg
ggcggcctcacctgcggttactatctgggttacgaggggttcgaggtcgatctgttcgag
gcgatgcccgaagcgggtggctggctgcgctacggcatccccgaataccggctgcccaag
gcgatcctcgatcaggagatcgccctgatgtgccaaagcggcatgcggatccacaccaag
cagcgactgggccaccagctcaccctctcggcgctgtgccgcgactatgatgcggtctgt
ctggcggttggcgcttccaaggcggtgccgatggattacccgggcagcaccctggccggt
tgctatctcggggtcgattacctcaaggatcggatgctggccaagcggctcaccaccggc
aagagggttgctgtgatcgggggtggtaataccgcaatcgactgcgcccgcacggcggtc
aggctgggggctgaaaccacccttatctatcgccgcacccgcgccgagatgcccgccgaa
gcctacgaaatcgacgaggcggagcacgaaggggtgcgctttttgatgctcaccaatccg
gtagagaatctgccggatagctgtggtcgcgtctgtcaggtgcgcctcgagaggatggcc
ctcggcgagccggacgcctccggtcgccgccgcccggagcccaccggcgagttattcctt
gaagagtttgataccgtgattgcggcagtgtcgcagcagccggatctcagctttatggaa
ggggagcccctcaccctccccttcacccgctggcagacgctggagtcccaccccgagacc
atgcacagcggccacggcaacctgttcgccatcggcgatctgcgccgcgggcccgcaacc
gccatcgaggcggttgccgatggtcgcaaggccgcgctggcgatcgatcagttcctccac
ggtgacatggtcgatccggttcgccccttcaacgcctgcaaggcacccacactcaagcag
gtcgatcccgcccagtttgctcacctgaaaaaagtcgcccgcaccatcatgccccatctg
gcagagaaggatcgcgagggcagctttgccgaggtggagcgcgggctgagtgatgccgat
gcccgcagcgaagccagccgctgcctcgagtgcggctgtcaggccaacaccgattgcgcg
ctacgcgactacgccaccgaatacaaggtcgagcagagcgctctcgataccagtcaatgc
cagaagtttgcagtggataacagcagcgaatttatcgtctttgatgccaaccgctgcatc
ggctgcggccagtgcgtgcagacctgtggtgagcaagcggtgcagggggtgctgcgcttt
gccaagaacagcgatggcaccctctcgaaccggccacagttcgacacgggactctcgatg
ggcgactcccactgcgtgcagtgcggtgcctgtgtacaggtctgccccaccggggccctg
gtggatgcccgcgacaagtcgcaggggcgcaccgaactgctcacgccggtcaataccatc
tgcacctactgcggggtcggctgcggtgtcaccctctacgtcgatgaggagcgcaaccgc
atccgctatgtggaggggaaccgcaactcaccggtcaaccaggggctgctctgcgtcaag
ggacgcttcggctttgactttatccagagcgaggagcgcctcaccaccccgcttgtccgt
aaaaatggcgaactggtgcccgctagctggcaggaggccatcgctctggtggccgagcgc
ttcaccgcactgcgccagcactatggcagcgatgcgctggcgggtttttcgtcggccaaa
accaccaacgaagagaactacctgttccagaagttcatgcgccgggagctgggcaccaac
aacgtggatcactgcgcgcggctctgccacgcctccaccgtcaccgggctggaggcgtca
cttggcagcggcgccatgaccaacgacatcccgagcattgatcactcggatctcatcttc
atcatcggctccgacacctcggcggcccaccccatcatcggctcccatatcaagcgggcc
gtcaccatgggcaaggcgcggctggtagtggccgatccgaagcggatcgagatggcggac
catgccagcctctatctggcccaccgccccggcaccgacgtgatgctgctcaacggcctg
atgcagcagatcatccagaacaactggcacgacaaggcctatattgccgatcgggtggaa
gggttcgaagcgctgcaagcggaggtgctctcccccgcttatgcaccggacaaggtggcc
ctcgtcaccggcgtaccggccgagcaggtgatcgagctcgcgcgccttatcggcaccgcc
gaacacaccgccgtctactactcgatggggatcacccagcacaccaccggccacgacaac
gtgcgcgccatcgccaacctgcaactgctatgcggcaacatcggcatcgaagggggtggc
atcaacccgctgcggggccaatccaacgtgcagggcgcctgtgacatgggggcgctgccc
aactgcctgcccggctatcagaaggtggccaaccccgaggtgcatgcccgcttcgtggca
gcctggcagcagccagacttgccgcgtacgcccggccttaccctcaccgagaccatagat
gccgcctgcgcgggcagcatcaaggggctctacgtgatgggagagaacccggtgctgagc
gatccggatcagcaccacgtcatcgaagggctcaagcagctggagtttctggtggtgcag
gatatcttcctctcggaaactgcccagctcgccgatgtggtgctcccctcatcctccttt
gccgagaagagcggccacttcaccaacaccgagcggcgagttcagcgcatctcccccgcc
ctcaatgcaccgggcgacgcgcgggaggattggtggatcatccagcagatcgccaacgcc
atgggtggcgactggcgctatcaacacccgaaggagatcaccgccgagatctgccaagtc
accccgcaatacgccggcatccagtgggacaaggtgggagcgcaagggctgcagtggccc
agcaacgatgcggcgcccgaaggcactcgcctgctccatagcaagcagttcacccgtggc
aagggggagatggtcgccaccccgttccgctatgccgccgaactgcccgatgagacctat
cccatcgtgctcaccaccggccgcctgctggagcagttccacaccggcaccatgacccgc
aagaccaaggggctcgacaagctggcaggcccgcgggtgatgatgagcgtggtggacgcc
gagcggttgggcatcagcaacagcgagcgggtgaaagtcaccagccgccgtggccatatc
gaactgcccaccttcgtcaccaagcggatgcagccgggtgtagtctttatcccgttccac
ttcgccgaagccccggccaaccggctcaccatcaatgccaccgacccccacgccaagatc
cccgagttcaaggtagctgcggtgcgcatcgacaagctggaatccccgtcgcaaactgga
gtgctatccatgcagaaggagccagccaagccagacatcgaggttccctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (33)   
   Pfam (33)   
All databases (51)   

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