KEGG   Aeromonas veronii B565: B565_1888
Entry
B565_1888         CDS       T01462                                 
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
avr  Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:avr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:avr03016]
    B565_1888
Enzymes [BR:avr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     B565_1888
Transfer RNA biogenesis [BR:avr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    B565_1888
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: AEB49923
Position
2110556..2111668
AA seq 370 aa
MHYQLITQQDELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LSALWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPLYEKVMAKLRESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDILAKAQQSAPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEDKAKASNIPPELIASKKIIHQYFTWSWRMNDEERARSDKPMLLQGWR
HELVGHLLAQ
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcactatcaacttatcactcagcaagacgaacttgagcagtatctcgcttctctggcc
gacgttcccctggctatcgatactgaattcgttcgcacccgtacctactacccccagctt
ggtctgttccagatctatgacggcgagcatctggcgctgctggatccgctgaccctggat
ctctccgccctctggcaacgactgggccgagcagggcagatcgccatcctgcacgcctct
ggcgaagatctggagcttatccagcatcaggcgggccacctgcccaaccagatgcacgac
acccagcttgctaccgcctttctcggttacggcgtctcggtcggctttggtgcgctggtg
aatgaattcctcggggtcgagctggaaaaagatcaggcgcgcaccgattggctggcccgc
ccgcttacgccacgtcagctcgaatacgcggcggcggatgtcttctacctgatgccgctc
tacgagaaggtgatggccaaactgcgggaaagcggcaagtttgcctggttcgagcaggag
tgccaaaaccactccgcccgcaagacccagggtagcgatccccgtcaggcatatcttgaa
atcgtcaacgcctggcaactgggtcgccgcgagctcgccattctgcgcgagctggccgcc
tggcgccagcaagaggcggtgcgccgggacctggccctcaattttgtggtgaaagagctg
cacctgttcaaggtggcggagcgtcgtcctgcctccctgcgggatctcaacgagctcggc
ctctcgcccatcgagatcaagatccacggcaaacggatgctcgatatcctcgccaaggcg
cagcagagcgctcctgacagctggcccgagcccattcgccggctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagataaggccaaggcgagcaat
attccgcccgagctgattgccagcaagaagatcatccaccagtacttcacctggagctgg
cggatgaatgacgaagagcgggcccgcagcgacaagccgatgttgctgcaagggtggcgt
catgagctggtcggtcacctgctggcacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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