KEGG T04270: AWM76

Aerococcus viridans: AWM76_00270

Entry

AWM76_00270       CDS       T04270

Symbol

gyrB

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

avs Aerococcus viridans

Brite

KEGG Orthology (KO) [BR:avs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avs03032]
    AWM76_00270 (gyrB)
   03400 DNA repair and recombination proteins [BR:avs03400]
    AWM76_00270 (gyrB)
Enzymes [BR:avs01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AWM76_00270 (gyrB)
DNA replication proteins [BR:avs03032]
Prokaryotic type
  DNA Topoisomerases
   AWM76_00270 (gyrB)
DNA repair and recombination proteins [BR:avs03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AWM76_00270 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 DUF3224

Other DBs

NCBI-ProteinID:

AMC01900

Position

60065..62047

AA seq 660 aa
MLTNEEALVQPEDLVSEEEKMAKKRELAKDYDASQIQVLEGLEAVRKRPGMYIGSTSASG
LHHLVWEIVDNSIDEALAGFAGHIQVTIEKDNSITVVDDGRGIPVDIQSNTGRPAVETVF
TVLHAGGKFGGGGYKVSGGLHGVGASVVNALSEWLHVYVHKNGRIYHQEFRQGAIVSDVE
QTGDTDTHGTVVHFKPDAEIFTETTTFEFEVLNRRVRELAFLNKGLRISLMDARSENHKT
ASYHYEGGIKEYIEYMNKDKDVLFEQPIYLEDEQDGIEVEVALQYTDGFHSNILSFANNI
HTFEGGMHESGAKTALTRVINNYARSQKLIKENEDNLTGEDVREGITLIVSIRHPDPQFE
GQTKMKLGNSEVRTITDNLFATHFETFLLENPQIARRIVDKGTVASKARLAAKRAREMTR
KKSGLEISNLPGKLADCSSRNPEESELFIVEGNSAGGSAKQGRSRHFQAILPIRGKILNV
EKASMDRILSNEEIRSLFTAMGTGWQNDFDITKARYHKLVIMTDADVDGAHIRALLLTLI
YRYMRPILDAGYVYIAVPPLYQVRQGKKIVYLDTDKQLEEYLQTIPATPKPAIQRYKGLG
EMDAEQLWETTMDPANRTLLQVNVDDAVEADKIINMLMGDHVEPRRDFIEENATYANIDL

NT seq 1983 nt +upstreamnt +downstreamnt
atgttgaccaatgaagaagcactcgtccaaccagaggaccttgtttctgaagaagaaaaa
atggccaaaaaacgcgaattggctaaagactatgatgctagccaaattcaagtattggaa
ggtctagaagctgtacgtaagcgtccagggatgtatatcgggtcaacttcagctagtggt
ttacaccatttagtatgggagattgtcgataactcaattgatgaggccctagcaggattt
gcgggtcacatccaagtcaccattgaaaaagataattctataacagttgtcgatgatggt
cgcgggattcccgttgatatccagtcaaataccggtcgtccagcggtagaaacagtcttt
actgtcctacatgccggtggtaaattcggcggtggcgggtataaagtatccggcggtctt
cacggggttggggcctctgttgtaaacgccctttctgaatggttgcatgtatatgtccat
aaaaatggccgcatctaccaccaagaattccgccaaggcgctattgtgtcggatgttgaa
caaactggtgatacagatacccatggtacggttgtgcattttaaaccggatgcagagatt
tttaccgagacaaccacctttgaatttgaagttttaaaccgacgtgtccgtgagttagcc
ttcttgaataagggcttaaggatttctttaatggatgctagatcagaaaaccataaaaca
gcttcttaccactatgaaggtgggattaaagaatatattgagtacatgaataaagataaa
gatgttttatttgaacaaccgatttatcttgaagatgagcaagatgggattgaagtagag
gtagctttacaatacacggatggcttccactcaaatatcttaagctttgcgaataatatc
catacttttgaaggtggtatgcatgaatcaggagcaaagaccgctcttacacgtgtgatt
aacaactatgctcgctcgcaaaagttaattaaagaaaatgaagataatttaactggggaa
gatgtgcgtgaagggatcaccttaattgtatctattcgccacccagacccacagtttgaa
ggtcaaaccaaaatgaaattgggaaactctgaagttcgaacgattaccgataatttattt
gcgacgcattttgaaacgttcctactagagaatccgcaaattgcccgccgtattgtcgat
aaaggtactgttgcgtctaaggctcgtctagctgctaagcgggcacgtgaaatgacccgt
aaaaaatcaggcctagagatttctaacctacctggtaaattagccgactgctcaagccgt
aatccagaagaatctgaattattcatcgttgaggggaactcggccggcggatcagcgaaa
caaggccgttcacgtcacttccaagctatcttgccgattcgaggtaaaatcttgaacgtt
gaaaaagcatcgatggacagaattttatctaatgaagaaatccgttcattatttacggca
atgggtacaggttggcaaaatgatttcgacatcaccaaggcacgttaccacaaattggtt
attatgactgatgccgatgtcgatggtgcccacatccgtgccttactattaaccttaatt
taccgttatatgcgccctatcttggatgctggctatgtctatatcgcagtgccaccttta
taccaagtccgtcaaggtaaaaagattgtctacctagatactgacaagcaattagaagaa
tacctacaaactataccagcaacaccaaaaccagccatccaacgttataaaggtttgggt
gaaatggacgctgaacaactttgggaaactacaatggacccagctaatagaacattatta
caagtaaacgtagacgatgcagtagaagcagacaaaatcatcaatatgttgatgggtgac
cacgttgaaccaagacgtgacttcatcgaagagaatgctacctacgccaacatcgattta
tag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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