KEGG   Avibacterium volantium: NCTC3438_00059
Entry
NCTC3438_00059    CDS       T06626                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
avt  Avibacterium volantium
Pathway
avt00300  Lysine biosynthesis
avt00470  D-Amino acid metabolism
avt01100  Metabolic pathways
avt01110  Biosynthesis of secondary metabolites
avt01120  Microbial metabolism in diverse environments
avt01230  Biosynthesis of amino acids
Module
avt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:avt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC3438_00059 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC3438_00059 (dapF)
Enzymes [BR:avt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCTC3438_00059 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: VEB21723
UniProt: A0A447SN50
Position
1:57159..57983
AA seq 274 aa
MQFSKMHGLGNDFVVVDAVTQNAYFPTETIKKLADRHTGIGFDQLLVVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVTMKGLTDKKDIAVSTAKGKMILTVQDDGMIRVNMGE
PIWEPAKIPFIANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVEDITTANVEQLGPLLE
SHERFPERVNAGFMQVINRNHIKLRVYERGAGETQACGSGACAAAAVGIMQGLLDNKVQV
DLPGGSLIIEWQGEGHPLYMTGDATHIYDGVIRL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcaattttccaaaatgcacggattaggcaatgattttgtggtggtcgatgccgttacg
caaaacgcttacttccccactgaaaccatcaaaaaactggcggatcgccacacaggaatt
ggctttgatcagcttttagtggttgagccaccttatgatcccgatttggattttcactat
cgcattttcaatgctgacggcagtgaagtggcacaatgcggcaatggcgcgcgctgtttc
gcccgctttgttacaatgaaaggcctgacggataaaaaagacatcgccgttagcaccgcc
aaaggtaaaatgatcctaacagtgcaagatgacggaatgatccgcgtgaatatgggcgaa
cctatttgggaaccagcgaaaatcccatttatcgccaacaaattcgagaaaaactacatt
ttacgcaccgacattcaaaccgtattatgtggcgcggtttctatgggcaacccacattgt
gtggtgcaagtggaagacattactaccgccaatgtagaacaattaggcccactattagaa
agccacgaacgttttcctgaacgcgtaaacgcaggctttatgcaagtcattaatcgtaac
cacataaaattacgcgtttatgaacgcggtgctggcgaaacccaagcctgtggcagtggc
gcttgtgccgccgccgcagtgggcattatgcaaggccttttggataacaaagtgcaagtg
gatctcccaggcggcagtcttattattgaatggcaaggcgaaggtcacccactttatatg
acaggcgatgccacgcatatttatgatggggtgattaggttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system