KEGG   Aliivibrio wodanis: AWOD_I_2175
Entry
AWOD_I_2175       CDS       T03808                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-E factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
awd  Aliivibrio wodanis
Brite
KEGG Orthology (KO) [BR:awd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:awd03021]
    AWOD_I_2175 (rpoE)
Transcription machinery [BR:awd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AWOD_I_2175 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: CED72237
UniProt: A0A090IP39
Position
1:complement(2488946..2489524)
AA seq 192 aa
MSEQLTDQVLIERVQRGDKQAFNHLVVKYQNKVCSLVARYVKNSGDVPDVAQEAFIKAYR
ALPTFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPASDVDAEDAEYYEGASALKEVTNPE
NLSLTEELRQIVFSTIDGLPEDLKTAITLRELEGLSYEDIAVVMECPVGTVRSRIFRARE
VVEKKIQPLMQR
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagtgagcagttaacagatcaagttttaattgagcgtgttcaacgtggtgataaacaa
gcctttaaccatttggtggttaaatatcaaaataaagtgtgtagcttggttgcccgttat
gtaaaaaacagcggtgatgttcctgatgtcgcgcaagaagcgtttatcaaagcatatcga
gcgttaccgacttttcgtggtgacagtgcattttacacctggttgtatcgcatagcagtt
aatactgcgaagaactaccttgttgctcaagggcgcaggcctccagcatcggatgttgat
gctgaggatgcagaatattacgaaggggcaagtgctttaaaagaagtcaccaaccctgag
aatttatcattaactgaagaattacgacaaatcgtattctctactattgatggtctacct
gaagatttgaaaacagcgataacattgcgagagctcgaaggcttaagttatgaagatatt
gctgttgtaatggagtgtccggttggtacggttcgttctcgtattttccgtgctcgtgaa
gttgttgagaaaaagattcaaccgctaatgcagcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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