KEGG T01732: Awo

Acetobacterium woodii: Awo_c19360

Entry

Awo_c19360        CDS       T01732

Symbol

topA

Name

(GenBank) DNA topoisomerase II

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

awo Acetobacterium woodii

Brite

KEGG Orthology (KO) [BR:awo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:awo03032]
    Awo_c19360 (topA)
   03400 DNA repair and recombination proteins [BR:awo03400]
    Awo_c19360 (topA)
Enzymes [BR:awo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Awo_c19360 (topA)
DNA replication proteins [BR:awo03032]
Prokaryotic type
  DNA Topoisomerases
   Awo_c19360 (topA)
DNA repair and recombination proteins [BR:awo03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Awo_c19360 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim zf-GRF Toprim_4 PdxJ zf-RRN7

Other DBs

NCBI-ProteinID:

AFA48715

UniProt:

H6LJW1

Position

2295995..2298064

AA seq 689 aa
MIKTLVIVESPAKAKTIKKYLPKGFEVEATMGHVIDLPKSRIGINIENNFAPEYIKIRGK
AALLKSLKSAAKKADQVYLATDPDREGEAISWHMANFLEIDLTTKCRIEFHEVTKKAVNA
AIENKREIDIDLVNSQQARRILDRLVGYSLSPFLWKKVKKGLSGGRVQSVVTRIIVDREE
EIEAFIPEEYWNLELLLKKTDDPIEFISKFYSEDGKKKTITIAEEAQRLEKIVDANAIIV
DKVKKRIRYQKPPVPFTTSTLQQEAYKVLGYTTQRTMRLAQQLYEGVEIKGSGLTGLITY
LRTDSTRIADEAVLESKAYIKQHFGDEYLGSEKKVGKKKNVQDAHEAIRPSSIMLTPEKA
KESLEPDQYRLYKLIWERLLCSQMSDAQYYVTDVDIACNNLIFKTKGETQKFDGFTRVNR
NPNKSEDSILPELSVGDDLIRLKTTKEQKYTKPPARYTEASLVKILEEKGIGRPSTYAPT
IATIKNRDYVEVIEKHFKPTELGVTVTHLMKEYFSDVVNISFTADMEDRLDSVSEGKTDW
VELLRNFYGDFEKALTNAQEKAEAVTIADPESDEDCELCGRRMVIKKGKYGRFLACPGFP
ECKNTKPFFEKTGGICSLCGGDIVKRTSKTGRTFYSCNNYPDCDYMNWDMPIPEKCPVCG
STLFQKGLGKRKSIYCDKKDCGYKAAPKE

NT seq 2070 nt +upstreamnt +downstreamnt
atgatcaaaacattggttattgttgagtcacccgcaaaagcaaaaacaataaaaaaatat
ttgccaaaaggtttcgaagttgaagcaacgatgggccacgtaatcgatctgcctaaaagt
cgaattggcattaatatagaaaataattttgcccccgaatatataaaaattcgtggcaaa
gcagcactcttaaaaagcttaaaaagtgcggctaaaaaagctgatcaagtctatttagca
actgaccctgatcgtgaaggagaagcaatttcctggcatatggctaactttttagaaatt
gatttaactactaaatgtcgaattgaatttcatgaagttaccaaaaaagcagttaacgcc
gctattgaaaataaaagagaaattgatatcgacttggtcaattcccaacaggcacgacgt
attttggatcgactagttggttattcactgagtccttttttatggaaaaaagttaaaaaa
ggattaagtggtggtcgcgttcaatcagtggtaactcggataattgttgatcgagaagaa
gaaatcgaagcattcatcccagaagaatattggaatttagaattattattaaaaaaaacc
gatgatcccatcgaatttatttcaaaattttactctgaagatggtaagaaaaaaacaatc
acgatcgcagaagaagctcaaagacttgaaaaaattgttgatgctaacgcaattattgtc
gataaagtaaaaaagcgaattcgctatcaaaaaccacccgtgccttttacaacaagcaca
ttgcaacaggaagcctataaagtccttggttatactacccaacggactatgcgtctagct
caacaactttatgagggagtcgaaatcaagggcagtggattaaccggtttaattacttat
ctgagaaccgattcgacacgtattgccgatgaagcagtattagagagcaaagcatatatt
aaacaacattttggtgatgaatacttagggagcgaaaaaaaagttgggaaaaagaaaaat
gtgcaagatgctcatgaagcaattcgtccctcgtctattatgttaacccctgaaaaggcc
aaagaatcattggaacccgatcaatatcgattatacaaactgatctgggaaagattacta
tgtagtcaaatgtctgatgcccagtattatgtgactgatgtggacattgcctgtaataat
ctaatttttaaaacaaaaggggaaactcaaaaatttgatggttttactcgcgtgaataga
aacccgaataaaagtgaagatagtatcttacctgaattgtctgttggtgatgatctcatt
cgattaaaaacaaccaaagaacaaaaatacacaaaaccgcctgcccgttacaccgaagca
tctctcgttaaaatattagaagaaaagggtattggaagaccgagtacatatgccccgaca
attgcgacgattaaaaatcgtgattatgttgaagtcattgaaaaacattttaaaccgact
gaacttggcgtcaccgttacgcacttaatgaaagaatatttcagtgatgttgttaatatt
tcttttaccgcagatatggaagatcgtcttgattctgtctcagaaggaaaaactgattgg
gttgaactgctgcgaaacttttatggtgatttcgaaaaagcactaacaaatgcccaagaa
aaagctgaagcggtaaccattgctgatcctgaatctgacgaagattgtgagttatgcggc
cgcagaatggtcataaaaaaaggtaagtatggtcgattcctagcctgtcctggttttcca
gaatgtaaaaacaccaaaccattttttgaaaaaaccggtggtatttgttcgttatgtggc
ggcgatattgttaaacgaacttccaaaacgggacgaaccttctattcatgtaataattat
ccggattgtgactatatgaattgggacatgccgatcccagaaaaatgtccggtttgtgga
tcgacactgtttcaaaaaggattgggaaaacgaaaatcgatttattgtgataaaaaagat
tgtggttataaagcagcaccaaaagaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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