KEGG   Achromobacter xylosoxidans NH44784-1996: NH44784_020551
Entry
NH44784_020551    CDS       T02785                                 
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
axo  Achromobacter xylosoxidans NH44784-1996
Pathway
axo02020  Two-component system
axo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:axo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NH44784_020551
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NH44784_020551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:axo03021]
    NH44784_020551
Transcription machinery [BR:axo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NH44784_020551
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID K-cyclin_vir_C
Other DBs
NCBI-ProteinID: CCH06024
Position
complement(2184463..2185890)
AA seq 475 aa
MTRPILELRPGQHLTLTPQLQQSIRLLQLSTLELEAEISQVLADNPLLERDDEPASVETQ
AESERESSVQDDEPAPERDTPVEEMPGSGGVYPDDDSSLPEAARPDTLREHLLGQLVLTR
AAPRDAALAALLIDELDENGYLGSPLEEILGWLPAEMEPDLDELRAALSLLQSFDPAGIG
ARDMSECLLLQLRSPDTARLPEAADPKALACARLVCAQHLALLATGNHARLCAAVGCDEA
TLRAAHALILRLEPRPGRAWTVPAADYAVPDVIVRKTRRGWQVTLNSAAVPRLQINGLYA
QMLANQKESAHAGLQSQLQQAKWMIRNVEQRFDTILRVAQAIVDRQTAFFSQGPAAMRPL
ILKDIAGELGLHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATAVQTFIR
QMVAEENRAKPLSDSQIMEKLADQGIVIARRTVAKYREALRIAPAALRKAQAAAR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgacccgtcctattttagaactgcggcccggccagcatctgacgctgacccctcaactg
cagcaatcgatccggttgctgcagctgtccacactcgagctcgaggcggaaatctcgcaa
gtgctcgccgacaatccgttgctggaacgcgacgatgagcctgcctccgtcgagacgcag
gccgaatccgagcgcgagtcgtcggtgcaggacgacgaacccgcgcccgagcgcgacacc
ccggtcgaggaaatgccgggttcgggcggggtctaccccgatgatgattccagcctgccc
gaggccgcccggcccgataccctgcgcgagcacctgctcgggcaactggtgctgacccgc
gccgcgccgcgcgacgccgcgctggcggcgctgctgatcgacgaactggacgagaacggc
tacctgggctcgcccctggaggaaatcctgggctggctgccggccgagatggagccggac
ctggacgagctgcgcgccgcgctgtcgctgctgcaatcgttcgacccggccggcatcggc
gcgcgcgacatgtccgagtgcctgctgttgcaattgcgcagtcccgacacggcccggttg
cccgaggccgcggatcccaaggcgctggcctgcgcccgcctggtctgcgcccagcatctg
gcgctgttggccaccggcaaccatgccaggctgtgcgccgcggtcggttgtgacgaggcc
acgctgcgcgcggcgcacgccctgatcctgcgtctggagccccgtccgggccgcgcctgg
acggtcccggccgccgattacgcggtgcccgacgtcatcgtgcgcaagacgcgccgcggc
tggcaggtgacgctcaacagcgccgccgtgccgcgactgcagatcaacggtttgtatgcg
cagatgttggccaaccagaaggagtcggcccacgccggcttgcagtctcagctgcaacag
gcgaaatggatgatccgcaacgtggagcagcgcttcgacaccatcctgcgagtggcccag
gccattgtcgaccgccagaccgccttcttcagccaggggccggcggccatgcgcccgctc
atcctcaaggacattgccggcgagctgggcctgcatgagtccaccatttcacgcgccacg
acacagaagtacatgctcactcccttcggtacgctggagctcaagcgcttcttcggggcg
ggggtgtcgaccgatggcggcgacgccacatccgccacggcggtgcagactttcatccgc
cagatggtggccgaggagaaccgggccaagccgctgtccgacagccagatcatggaaaaa
ctggccgaccagggcatcgtcatcgcccgcaggacggtcgcgaaataccgcgaggcactg
cggatcgcgccggccgcgctgcgcaaggcgcaggccgcggcgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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