KEGG   Achromobacter xylosoxidans NH44784-1996: NH44784_022631
Entry
NH44784_022631    CDS       T02785                                 
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
axo  Achromobacter xylosoxidans NH44784-1996
Pathway
axo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:axo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NH44784_022631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:axo03021]
    NH44784_022631
   03400 DNA repair and recombination proteins [BR:axo03400]
    NH44784_022631
Enzymes [BR:axo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NH44784_022631
Transcription machinery [BR:axo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NH44784_022631
DNA repair and recombination proteins [BR:axo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NH44784_022631
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C Biotin_lipoyl_2 RPOC_hybrid
Other DBs
NCBI-ProteinID: CCH06228
Position
2418398..2422642
AA seq 1414 aa
MKALLDLFKQVSQDEQFDAIKIGIASPEKIRSWSYGEVRKPETINYRTFKPERDGLFCSK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIMSDDDFLAKTEEYGDDFRALM
GAEAVRELLRTIDIDREVETLRGELKATSSEAKIKKISKRLKVLEGFQKSGIKAEWMVME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIILRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKAAKKLVESQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNVLFPANGEPSIVPSQDIVLGLYYTTRERINGKGEGIFFTDVAEVQRAYDNG
EVELQSRITVRLKEHERDENGEWQPVIRRHETTVGRALLSEILPKGLPFTVLNKALKKKE
ISRLINQSFRRCGLRDTVIFADKLMQSGFRLATRGGISIAMGDMLIPSAKEGILAEASRE
VKEIDKQYSSGLVTSQERYNNVVDIWGKAGDKVGKAMMEQLATEPVINRHGEEVRQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVITEDDCGTSQGYNMKALVEGGEVIEPLRDRIL
GRVAAIDIVNPDTQETAITAGTLLDEDMVDMIDRIGVDEVKVRTPLTCETRHGLCAHCYG
RDLGRGTSVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSALASAVETKSSGVVGF
ASTMRYVTNAKGERVAISRSGELAIFDDNGRERERHKIPYGATVLVGDGEAVKAGARLAT
WDPLTRPIVSEYGGAVRFENIEEGVTVAKQVDEVTGLSTLVVITPKTRGGKIVMRPQIKL
VNENGEDVKIAGTDHSVNISFPVGALITVRDGQQVAVGEVLARIPQESQKTRDITGGLPR
VAELFEARSPKDAGMLADVTGTVSFGKDTKGKQRLVITDLEGVSHEFLIPKEKQVLVHDG
QVVNKGEMIVDGPADPHDILRLQGIEKLATYIVDEVQDVYRLQGVKINDKHIEVIVRQML
RRVNIVDAGDTEFIPGEQVERSELLNENDRVNAEDKRPATYENVLLGITKASLSTDSFIS
AASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAYHHARKDKEALEAAERE
AARQLANPFEDSPVTVGSDADVPSSDVGSEDAAE
NT seq 4245 nt   +upstreamnt  +downstreamnt
atgaaagcgctactcgacctctttaagcaagtctcgcaagacgagcaattcgatgccatc
aagatcggcatcgcctcgcccgagaagatccgttcgtggtcctacggcgaagttcgcaag
cccgagaccatcaactaccgcacgttcaagcccgagcgtgacggtctgttctgctccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgttgaagttaccgttgccaaggttcgccgtgag
cgcatgggccacatcgagctggccagccccgtcgcgcacatctggttcctgaagagcctg
ccgtcgcgtctgggcatggtgctcgacatgaccctgcgcgacatcgaacgcgtcctgtac
ttcgaagcctggtgcgtgatcgaacccggcatgacgccgctcaagcgcggccagatcatg
tcggatgacgatttcctggccaagaccgaggaatacggcgacgacttccgtgccctgatg
ggcgccgaagccgtgcgcgaactgctgcgcaccatcgacatcgaccgcgaagtggaaacg
ctgcgcggcgaactgaaggccaccagctcggaagccaagatcaagaagatctccaagcgc
ctgaaggtgctggaaggcttccagaagtccggcatcaaggccgagtggatggtcatggaa
gtgctgcccgtgctgccgccggacctgcgtccgctggtgccgctggacggcggccgtttc
gcgacctccgacctgaacgacctgtaccgccgcgttatcaaccgcaacaaccgtctgaag
cgcctgctggagctgaaggctcctgaaatcatcctgcgcaatgaaaagcgcatgctgcag
gaagcggtcgactcgctgctggacaacggtcgccgcggcaaggccatgaccggcgccaac
aagcgccagctcaagtccctggccgacatgatcaagggcaagagcggtcgtttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtgggtccgcag
ctcaagctgcaccagtgcggcctgcccaagctgatggccctggaactgttcaagccgttc
atcttcaatcgcctggagatgatgggcctggccacgaccatcaaggccgccaagaagctg
gtggaaagccaggaaccggtggtctgggacatcctggaagaagtcatccgcgaacacccg
gtcatgctgaaccgtgcgcccacgctgcaccgtttgggcatccaggcgttcgagccggtc
ctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgtgccgctgtcgctggaagcccagctcgaagcg
cgcacgctgatgctggcttcgaacaacgtgctgttcccggccaacggcgaaccgtcgatc
gtgccgtcccaggacatcgtgctgggtctgtactacacgacgcgcgagcgcatcaacggc
aagggcgaaggcatcttcttcaccgacgtcgctgaagtgcaacgcgcctacgacaacggc
gaagtggagctgcaaagccgcatcaccgtgcgcctgaaggaacacgagcgtgacgagaat
ggcgaatggcagccggtgatccgccgccacgaaaccaccgtcggccgcgcgctgctgtcc
gagatcctgcccaagggcctgcccttcaccgtcctgaacaaggcgctgaagaagaaggaa
atctcgcgcctgatcaaccagtcgttccgccgttgcggcctgcgcgacacggtgatcttc
gccgacaagctgatgcagtcgggcttccgcctggccacccgcggcggtatctcgatcgcc
atgggcgacatgctgatcccgtcggccaaggaaggcatcctggccgaagccagccgtgaa
gtgaaggaaatcgacaagcagtactcgtcgggtctggtcacgtcccaggaacgctacaac
aacgtggtggacatctggggcaaggccggcgacaaggtcggcaaggcgatgatggaacaa
ctggccaccgaacccgtgatcaaccgtcacggcgaggaagtgcgccaggagtcgttcaac
tccatctacatgatggctgactcgggcgcccgcggttcggccgcccagatccgccagctg
gccggcatgcgcggcctgatggccaagccggacggctcgatcatcgagacgcccattacc
gcgaacttccgtgaaggcctgaacgtgcttcagtacttcatctcgactcacggcgcgcgt
aagggtctggccgacacggcactgaagaccgcgaactcgggctacctgacccgtcgtctg
gtcgacgtgacgcaggacctggtgatcaccgaggacgattgcggcacctcgcagggctac
aacatgaaggccctggtggaaggcggtgaagtcatcgagccgctgcgcgaccgtatcctg
ggccgcgtggctgccatcgacatcgtcaacccggacacgcaggaaacggccatcaccgcc
ggcaccctgctggacgaagacatggtcgacatgatcgaccgcatcggcgtggatgaagtc
aaggtccgcacgccgctgacctgcgaaacgcgccacggcctgtgcgcgcactgctatggc
cgtgacctcggccgtggcacttcggtgaaccagggcgaagcggtcggcgtcatcgccgcc
cagtccatcggtgaaccgggcacgcagctgacgatgcgtacgttccacatcggtggcgcg
gcgtcgcgttcggccctggccagcgcggtggaaaccaagtccagcggcgtggtcggcttt
gccagcaccatgcgctacgtcaccaacgccaagggcgaacgcgtcgcgatctcgcgctcg
ggcgaactggcgatcttcgacgacaacggccgcgaacgcgaacgccacaagatcccgtac
ggcgcgaccgtgctggtgggcgacggcgaggccgtgaaggccggcgcgcgcctggcgacg
tgggatccgctgacccgtccgatcgtgtcggaatacggtggcgctgtccgcttcgagaac
atcgaagaaggcgtgaccgtggccaagcaggtggacgaagtcaccggcctgtcgacgctc
gtcgtcatcacgcccaagacccgtggcggcaagatcgtcatgcgtccgcagatcaagctg
gtcaacgagaacggcgaagacgtcaagatcgccggcaccgatcactcggtgaacatctcg
ttcccggtcggcgcgctgatcaccgtgcgtgacggccagcaggttgccgtgggtgaagtc
ctggcgcgtattccgcaggaatcgcaaaagacccgcgacattaccggcggtctgccgcgc
gtggccgagctgttcgaagcccgttcgcccaaggatgccggcatgctcgccgacgtcacc
ggcacggtctcgttcggcaaggacaccaagggcaagcagcgcctggtcatcaccgacctg
gaaggcgtcagccacgagttcctgattccgaaggaaaagcaggtgctggtgcacgacggc
caggtggtgaacaagggcgaaatgatcgtggacggcccggccgatccccacgacatcctg
cgcctgcagggcatcgagaagctggcgacctacatcgtcgacgaagtgcaggacgtgtac
cgtctgcagggcgtgaagatcaacgacaagcacatcgaagtgattgttcgtcagatgctg
cgccgtgtgaacatcgtcgatgcgggcgataccgagttcatcccgggcgagcaggtcgag
cgctccgagctgttgaacgagaacgaccgcgtcaacgctgaagacaagcgtccggccacg
tacgaaaacgtgctgctgggtatcaccaaggcctcgctgtcgaccgactcgttcatctcg
gccgcctcgttccaggaaaccacgcgtgtcctgaccgaagccgccatcatgggcaagcgc
gacgacctgcgtggcctgaaggaaaacgtcatcgtcggccgcctgatcccggccggtacc
ggcctggcgtaccaccatgcccgcaaggacaaggaagccctggaggccgcggaacgcgaa
gccgcccgccagctggccaacccgttcgaagactcgccggtcacggtgggctcggacgcc
gatgtcccgtcgtccgacgtgggcagcgaggacgccgccgaataa

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