KEGG   Achromobacter xylosoxidans NH44784-1996: NH44784_054121
Entry
NH44784_054121    CDS       T02785                                 
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
axo  Achromobacter xylosoxidans NH44784-1996
Pathway
axo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:axo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NH44784_054121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:axo03019]
    NH44784_054121
   03110 Chaperones and folding catalysts [BR:axo03110]
    NH44784_054121
   03029 Mitochondrial biogenesis [BR:axo03029]
    NH44784_054121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:axo04147]
    NH44784_054121
Enzymes [BR:axo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     NH44784_054121
Messenger RNA biogenesis [BR:axo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NH44784_054121
Chaperones and folding catalysts [BR:axo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   NH44784_054121
Mitochondrial biogenesis [BR:axo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    NH44784_054121
Exosome [BR:axo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NH44784_054121
  Exosomal proteins of other body fluids (saliva and urine)
   NH44784_054121
  Exosomal proteins of breast cancer cells
   NH44784_054121
  Exosomal proteins of colorectal cancer cells
   NH44784_054121
  Exosomal proteins of bladder cancer cells
   NH44784_054121
SSDB
Motif
Pfam: Cpn60_TCP1 DNA_ligase_OB Bap31_Bap29_C
Other DBs
NCBI-ProteinID: CCH09355
Position
5811277..5812899
AA seq 540 aa
MSAKDVKFHDNARARVVKGVNILADAVKVTLGPKGRNVLLERSFGAPTITKDGVSVAKEI
ELKDKFENMGAQIVKQVASKTADVAGDGTTTATVLAQAIVQEGMKYVASGMNPMDLKRGI
DQAVSGVVEALRKLSKPISTSKETAQVAALSANADEAIGKIIADAMDKVGREGVITVEDG
KSLDNELDIVEGMQFDRGYLSPYFITDPEKQVAQLDDPLVLLYDKKISNVRELLPVLEGA
AKAGKPLLIVAEDVEGEALATLVVNAMRGVLKVTAVKAPGFGDRRKAMLEDIAILTGATV
ISEETGKQLEKATLQDLGSAKRIEVRKEDTIIIDGAGKQEAIDARVKTLRKQIEDATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RARAAIQDLKGANADQDAGIRIVRRALEAPLRAIVANAGEEPSVVVAKVADAKGNHGYNA
ATGEYGDLVEIGVVDPTKVTRTALQNAASIAGLILTTDATVAQAAEETKPQAAPAEAMDF
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagtgccaaagacgtcaaattccacgataacgcccgcgcccgcgtggtcaagggcgtc
aacatcctagccgatgccgtcaaggtgacgctcggccccaagggccgcaacgtgctgctg
gaacgcagcttcggcgcgcccaccatcaccaaggacggggtctcggtcgccaaggagatc
gaactgaaggacaagttcgagaacatgggcgcgcagatcgtcaagcaggtcgcctccaag
accgccgatgtggccggcgacggcaccaccaccgccaccgtgctggcgcaggccatcgtg
caggaaggcatgaagtacgtggcctccggcatgaacccgatggacctgaagcgcggcatc
gaccaggccgtgtcgggcgtggtggaggccctgcgcaagctttccaagccgatctccacc
agcaaggaaacggcgcaggtggcggcgctgtcggccaacgcggatgaagccatcggcaag
atcatcgccgacgcgatggacaaggtcgggcgcgaaggcgtgatcaccgtcgaggacggc
aagtcgctggacaacgaactcgatatcgtcgagggcatgcagttcgatcgcggctacctg
agcccctacttcatcaccgatcccgagaagcaggtggcccagctcgacgacccgctggtg
ctgctgtacgacaagaagatctccaacgtgcgtgaactgctgccggtgctggaaggcgcc
gccaaggccggcaagccgctgctgatcgtggccgaggatgtcgaaggcgaagcgctcgcc
acgctggtggtcaacgccatgcgcggcgtgctcaaggtcaccgcggtcaaggcgccgggc
ttcggcgaccgccgcaaggccatgctggaggacatcgccatcctcacgggcgccacggtc
atttcggaagagaccggcaagcagctcgagaaggccacgctgcaggacctgggcagcgcc
aagcgcatcgaggtgcgcaaggaagacaccatcatcatcgacggcgccggcaagcaggaa
gccatcgacgcccgcgtcaagacgctgcgcaagcagatcgaggacgccaccagcgactac
gaccgcgagaagctgcaggaacgcgtggccaagctggctggcggcgtggccgtcatcaag
gtcggcgccgccacggaagtcgagatgaaggagaagaaggaccgcgtcgacgatgccctg
catgcgacccgcgcggccgtcgaggaaggcatcgtgcccggcggcggcgtggcattgctg
cgcgcccgcgcggccatccaggacctcaagggcgccaatgccgaccaggacgccggcatc
cgcatcgtgcgccgcgccctggaggcgccgctgcgcgccatcgtggccaacgccggcgag
gagccgtcggtggtggtggccaaggtggcggacgccaagggcaatcatggctacaacgcg
gccaccggcgagtacggcgatctggtagaaatcggcgtggtcgacccgaccaaggtcacg
cgcaccgcgctgcagaacgccgcgtcgatcgccggcctgatcctgacgacggacgcgacc
gtcgcgcaggccgccgaagagaccaagccgcaggcggcgcccgccgaagccatggacttc
tga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system