KEGG   Ilumatobacter coccineus: YM304_19880
Entry
YM304_19880       CDS       T02501                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
aym  Ilumatobacter coccineus
Pathway
aym03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    YM304_19880 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aym03400]
    YM304_19880 (ruvB)
Enzymes [BR:aym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YM304_19880 (ruvB)
DNA repair and recombination proteins [BR:aym03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YM304_19880 (ruvB)
    RecFOR pathway proteins
     YM304_19880 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 Resolvase nSTAND3 Rad17 Sigma54_activ_2 AAA_2 IstB_IS21 AAA_14 TsaE AAA_17 AAA_18 NB-ARC
Other DBs
NCBI-ProteinID: BAN02302
UniProt: A0A6C7E8F3
Position
2205061..2206152
AA seq 363 aa
MRDEFLDPNIRADDESAVSAVLAGGAAGGEADADSEVGLRPQALDEFVGQRELKEHLTIV
LEAARKREQSVDHLLFAGPPGLGKTTLAGIVAVEMGVQLHITSGPALERAGDLAAILTKL
EEGDVLFIDEIHRLSRSVEEILYPAMEDFQLDIVVGKGPAASSIRLTMPPFTLVGATTRT
GMITGPLRDRFGLVARLDYYDTDELRMIVERAAGILDVDIDTDGAQQIARRSRGTPRIAN
RLLRRVRDFAEVRADGSITSTVAAEGLALFGVDDRGLDKVDRAILSNLCGQFGGGPVGLS
TLAISIGEQPETVEDVYEPFLITQGMIARTPRGRVALAAAYEHVGLEVPPSRAPENAATL
FDG
NT seq 1092 nt   +upstreamnt  +downstreamnt
gtgcgtgacgaattcctcgatccgaacatccgggccgacgacgagtcggcggtgtccgcc
gtgctcgccggtggagcagcaggcggcgaggccgacgccgattccgaagtcgggctccga
ccgcaagcgctcgacgagttcgtcggtcagcgcgaactcaaagaacacctcaccatcgtg
ctcgaagcggcccgcaaacgcgagcagtcggtcgatcacctgctgttcgccgggccaccc
ggcctcggcaagaccacgctcgccggcatcgtcgcggtcgagatgggggtgcaactccac
atcacgtcgggtccggcactcgaacgcgcaggcgatctggccgccatcctcacgaagctc
gaagagggcgacgtgctcttcatcgacgagatccaccgactctctcggtcggtcgaggag
atcctgtacccggcgatggaggacttccagctcgacatcgtcgtcggcaaggggcctgcg
gcgtcgagcatccgcctgaccatgccgccgttcacgctggtcggcgccaccacacgcacc
ggcatgatcaccggtccgctgcgcgatcgtttcgggctcgtcgcccggctcgactactac
gacaccgacgagctgcggatgatcgtcgaacgtgcggcggggatcctcgacgtcgacatc
gacaccgacggcgcccagcagatcgctcgacgatcgcgaggtacgccccgtatcgccaac
cgcctgttgcggcgcgtgcgcgacttcgccgaggtgcgtgccgacggttcgatcacctcg
acggtcgccgccgaaggcctggcgctgttcggcgtcgacgatcgcggtctcgacaaggtc
gaccgtgcgatcctgtcgaacctctgcggtcagttcggtggcgggccggtcggcctctcg
acactggccatcagcatcggtgagcaacccgagacggtcgaagacgtctacgaaccgttc
ctcatcacgcagggcatgatcgcccgcaccccacgtggtcgcgtggcgctcgctgcggcg
tacgagcacgtgggcctcgaggttccgccgtcgcgcgctcccgagaacgcggccaccctg
ttcgacggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (128)   
   KEGG ORTHOLOGY (1)   
   RefGene (125)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (154)   

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