KEGG   Aster yellows witches'-broom phytoplasma AYWB: AYWB_129
Entry
AYWB_129          CDS       T00314                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ayw  Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03030  DNA replication
ayw03430  Mismatch repair
ayw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ayw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AYWB_129 (dnaE)
   03430 Mismatch repair
    AYWB_129 (dnaE)
   03440 Homologous recombination
    AYWB_129 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ayw03032]
    AYWB_129 (dnaE)
   03400 DNA repair and recombination proteins [BR:ayw03400]
    AYWB_129 (dnaE)
Enzymes [BR:ayw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AYWB_129 (dnaE)
DNA replication proteins [BR:ayw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AYWB_129 (dnaE)
DNA repair and recombination proteins [BR:ayw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AYWB_129 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Other DBs
NCBI-ProteinID: ABC65246
UniProt: Q2NJZ7
Position
153277..156027
AA seq 916 aa
MRGVFYLQSFYSLLQSLNSLETLVQKAKENNYDFVALSDDNLYGMPTFLKLCHKYQIKPI
LGLKINFFHNNQLATLLIYAKNDQGIKNLIQISTIIKNKETPQINLNKIANLGKGLFTLI
PGENPFFDEIFFRDQKDKFFQISTQLLKIFDELVLGISYQNSFLELLSENIIDFANHFQI
PYVPVNKTCYDTFQAQPTYQILTQMENKKNDNQTDLSFLTKDNFDSTYNAQTHKKMFIYL
KKLIFSIKYQNYLPQKFFLPSFVDFLQPQKITAKDYLKQISYEGLRQYINFKSPKYTKYQ
QRLDQELKIIADMEYDNYFLIVGDVVRYAKKQGILVGPGRGSSSGSLVCFCLQITEIDPL
QYELIFERFLNPQRKNMPDIDLDFPDNTRDLIIQYVCQKYGTKHVASIITFGRFVSQKAI
INELVKFMPTVKEFQTKRVLAYLDKKSTYQKETLDLQMKNLLTMASYIEGMPRFTGTHPA
GIILSQIPLYQIIPLQKGTHNNLQQTQWEASDLESIGLLKIDFLGLRSLTLINQMVLAIQ
KNNFKFSLFKIPLNDKKTFELLQQGKTIGIFQLESYNAKIFLQKMMPQKFEDLIALLALN
RPGPIDSFNMFLKNRHQKTTTFFSPLIDFILQPTYGIILYQEQIMQILAVFAKYSLAQAD
LFRRAISKKEKDLLLQEKNNFIAQSKEQGRDLTIAYKIYDYILKFANYGFNKSHSVAYSL
ISYRMAYLKANHFIAFVITLLNDAIGDTSQTEILLKEVIQKGIIIEPPHIFSSQDKYYFQ
DNKLFLPLTIIKGINVSFCQELMKKQKNLIKEYQKLTKTSQSPLYYSFKTFKQQLFPFLT
EPLLTNLIFAGAFDKMGLNRNTLEQNKDLKEVKYYPYSDYEPEIHPELPLQELVIKQKKA
LGFGLHNLLINQKNKS
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgagaggcgttttttatttgcaaagtttttatagcttattgcaaagtcttaattcttta
gaaactttggtgcaaaaagccaaagaaaataattatgattttgttgctttgagtgatgat
aatttatatggcatgccaacttttttaaaattatgtcataaataccaaatcaagcctatt
ttaggacttaaaataaatttttttcacaacaatcaactagcaacacttttaatttatgct
aaaaacgaccaaggaatcaaaaatttaattcaaatttcaactattattaaaaataaagaa
acaccccaaattaacttaaataaaattgctaatttaggaaaaggtttgtttactttgatt
cctggagaaaatcctttttttgatgaaatctttttccgcgaccaaaaagataaatttttt
caaatatctactcaattattaaaaatatttgacgaacttgtattgggtatttcttatcaa
aattcctttttggaattactttctgaaaacatcattgattttgcaaaccacttccaaatt
ccttatgtaccagttaataaaacttgctatgatacttttcaagcccaaccaacctatcaa
atacttacacaaatggaaaataaaaaaaacgacaaccaaactgatttatcttttttaacc
aaagataattttgatagcacatacaacgcccaaacacacaaaaaaatgtttatttattta
aaaaaattaatcttttctattaaatatcaaaattatttaccacaaaaattttttttgcct
tcctttgttgattttttacaaccccaaaaaataactgccaaagattacttaaaacaaata
tcttatgaaggtttacgccaatatattaattttaaaagccctaaatatacgaaataccaa
caaagactagatcaagaattaaaaattatagctgatatggaatatgataattatttttta
attgtaggtgatgttgtaagatacgccaaaaaacaaggtattttagtaggccctggtaga
ggctcttcttcgggttctttggtgtgtttttgtttacaaattacagaaattgatccttta
caatatgaacttatttttgagcgttttttaaatcctcaaagaaaaaatatgccagatatt
gaccttgattttccagacaatacaagggatttaattattcaatatgtttgtcaaaagtac
ggcaccaaacacgtagcaagtattattacttttggtagatttgtaagtcaaaaagccatc
attaatgaattagtgaaatttatgcccacagtaaaggaattccaaaccaaacgtgttttg
gcatatttggataaaaaaagcacttatcaaaaagaaactttggatttgcaaatgaaaaac
ttacttacaatggcatcttatatcgaaggaatgccacgctttacagggacccatccagca
ggaattattttaagccaaatccctctttatcaaattattcctttacaaaaaggcactcac
aataacttacaacaaacccaatgggaagcctctgaccttgaatcaatcggacttctcaaa
atagattttttgggattaagaagtcttactttgataaatcaaatggttttagccattcaa
aaaaataacttcaaatttagtctttttaaaatacctttaaacgacaaaaaaacttttgag
ttgttgcaacaaggaaaaacaataggtatttttcaattagaatcttacaacgccaaaatc
tttttacaaaaaatgatgccccaaaagttcgaagacctaattgccttacttgccttaaac
agaccaggacccatcgattcttttaatatgtttttaaaaaaccgccatcaaaaaactacc
actttttttagtcctttgattgattttatcctccaacccacttatggcattattctttat
caagaacaaattatgcaaattttagctgtctttgccaaatacagtcttgcccaagcagac
ctttttagaagagctattagcaaaaaagaaaaagatttattattgcaagaaaaaaacaac
tttattgcccaaagcaaagaacaaggacgtgaccttacaatagcctataaaatttatgat
tatattttaaaatttgccaattacggttttaacaaaagtcacagcgtcgcttattcttta
attagttatcgtatggcttatttaaaagccaatcattttattgcttttgtaattacttta
ttaaatgatgctattggggatacatcccaaacagaaattttgctaaaagaagttatccaa
aaaggaatcattatagaaccaccccatatatttagtagccaagataaatattattttcag
gacaataaattatttttgcctcttaccattattaaaggaataaatgtttctttttgccaa
gaattaatgaaaaaacaaaaaaatttaattaaagagtaccaaaaattaacaaaaacttca
caatctccactttattattcttttaaaacgtttaaacaacaattatttcctttcctcact
gaacctttattaactaatttaatttttgcaggtgcctttgataaaatgggattaaaccgc
aatactttggaacaaaacaaagatttaaaagaagttaaatattatccatattcagactac
gaacctgaaatacacccagaattgcctttacaagaactcgtcattaaacaaaaaaaagca
ttagggtttggacttcataatttattaatcaatcaaaaaaataaatcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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