KEGG   Aster yellows witches'-broom phytoplasma AYWB: AYWB_495
Entry
AYWB_495          CDS       T00314                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ayw  Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ayw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AYWB_495 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ayw03021]
    AYWB_495 (rpoA)
   03400 DNA repair and recombination proteins [BR:ayw03400]
    AYWB_495 (rpoA)
Enzymes [BR:ayw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AYWB_495 (rpoA)
Transcription machinery [BR:ayw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AYWB_495 (rpoA)
DNA repair and recombination proteins [BR:ayw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AYWB_495 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_5 HTH_6 RAD51D_N
Other DBs
NCBI-ProteinID: ABC65612
UniProt: Q2NIY1
Position
complement(518658..519650)
AA seq 330 aa
MKNLKFIKPFFVEEIDENPISGKFTIKPLERGYGITVGNALRRVLLSSLPGAAIVNVKIQ
GVEQEFTTIPGVYEDVMTIILNLKKIVFAVDDESDDFEEKLELIAKGPQRLTAASFELPA
GVKIINPDHYITTLSDDVCFHMTVTIKKGIGYVGAKENKVHIENQVGVIAIDSLFTPVVN
VSYQVEKKLGNKDELTIEITTNGALLAKEALATAASILVDHFNVLVELSQKPAHVEFVSE
SKKEAHNYVLDLEIEQLDLSVRLFNSLKRAGIDTVASLVKLSEKEVVKLKSLGRKSFQEL
KDKFLEYGLEFNDYLKEALHHSVEEDKDKH
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaaaatcttaaatttattaaacctttttttgttgaagaaattgatgaaaatcccatt
tccgggaaattcactatcaaacctttagaaagaggatacggcattactgtgggaaacgcc
ctaagaagagttttgttatcttctttgcctggtgctgctattgtaaatgttaaaattcaa
ggagtagaacaagaattcactactattccgggcgtttatgaagatgtcatgacaattatt
ttaaatttaaaaaaaattgtttttgccgtagacgacgaatcagatgattttgaagaaaaa
ttagaattaatcgctaaaggaccacaacgcctaactgctgcttctttcgaactgcctgca
ggagttaaaatcatcaaccccgatcattacattaccaccctttctgatgatgtttgcttt
catatgacagtcactattaaaaaaggcatcggttatgttggtgccaaagaaaataaagtt
cacattgaaaatcaagtaggcgttattgcaattgactctttatttactcctgttgttaat
gtttcttatcaagtagaaaaaaaattaggcaataaagacgaattaactattgaaattacc
actaacggcgctcttttagctaaagaagctttagcaactgcagctagcattttagtagat
catttcaatgttttagtagaattaagccaaaaacctgctcatgtagaatttgtttctgaa
tctaaaaaagaagcccataattacgtgctagatttagaaattgaacaattagatttatct
gtaagacttttcaacagtcttaaaagagcagggattgatacagttgcttctttagtgaaa
ttaagtgaaaaagaagttgtcaaactgaaaagcctaggacgaaaatctttccaagaatta
aaagataaatttttagaatatggtttagaattcaacgattacctcaaagaagctttgcat
catagcgttgaagaagacaaagacaaacattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system