KEGG   Azoarcus sp. KH32C: AZKH_0266
Entry
AZKH_0266         CDS       T02502                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
aza  Azoarcus sp. KH32C
Pathway
aza03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aza00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AZKH_0266 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aza03400]
    AZKH_0266 (recB)
Enzymes [BR:aza01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AZKH_0266 (recB)
DNA repair and recombination proteins [BR:aza03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AZKH_0266 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 AAA_30 TelK_muzzle AAA_11
Other DBs
NCBI-ProteinID: BAL22612
UniProt: H0Q0W5
Position
312642..316370
AA seq 1242 aa
MNRETLTAPQPLAPQPLMPLTFPLHGSRLIEASAGTGKTFTIAALYVRLVLGHGGDAAFA
RPLTPPEILVVTFTDAATKELRDRIRARLAEGAEYFFADPLAVGPKEPGKDFLHDLRAEY
PEEAWPGCARKLQLAAEWMDEAAVSTIHGWCKRMLSEHAFDSDSLFTQRLETDQRELLAE
VVRDFWRTFFAPLDAEDVGEIARWWQTPDELQGQLGKLLEHAEGLPDAAPPVESIAAARA
EKAKKLAQLKAPWPDWTQELEALLDAAVAAKQVVGSKIQKRYYQPWLDALAAWAADPAAD
ALDLKKGWERLSRHGLADAWKDGDPPDHPALDAIPALRAALADLPHAHAELLRFAARWVA
ARFAAEQQRHAQMGFNDLLTRLDAALRQPNGKRLAEVIRAQFPVALIDEFQDTDPVQYRI
FDAVYRIADNAPDTGLVLIGDPKQAIYAFRGADIFTYLAAREATGGRLYTLGTNYRSTVT
MVTAVNRCFEQAEGRDTGEGAFLFRTMEGNRVPFLPVAASGRRERLVVGDAAVPALTCWT
LEAPESGKVLGVGAYRGSMAAACAAEIVRLLNLGQRGRAGFLRDGELAGLRPADIAILVN
NRTEANAVREALAACGVRSVYLSDQESVFASAQAAELQLWLSACAEPDDDSLLRAALATA
SLGLPWEALDRLRLDELEWEDRVLQFREYRQCWREQGVLPMLRRLLGDFDVPRRLLACAD
GERALTDLLHLAELLQHASVALDGEHALIRHLAEQRADAGNGDDARKLRLESDADLVQVV
TIHKSKGLEYPLVFLPFACAFRETSSDELPLKWHDAAGRLHLTLAADAAAAGLADRERLG
EDLRKFYVALTRARHATWLGFAPVDGLHRSAPGYLLKGGATIAPDSLAATLVEFKGECED
IAIAAAPALSGQRFVPHAARVEIGPARTPRRAVREFWWIASYSGLRTEEGAAAEAPTQAA
ATPIAADTPAEETFAEILDEAPVAEAAIAPEDDTRLHRFARGAGPGTFLHELLEWAAREG
FGRVAARPERARDMIARRCAVRGWSHWTEPLTGWLLHFITTPLPLPDGATPRFADLAGCR
PEMEFWFETHHANLSRLDALVREHTLAAAPRPALVPGQLNGMLKGFIDLVFEYRGRYYVA
DYKSNWFGPDDAAYTADAMRDAVLAKRYELQYVLYLFALHRLLKSRLPDYDYDRHVGGAV
YLFLRGSHAPTRGLHCERPPRTLIEALDAEFGERVAAPEACR
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgaaccgcgaaaccctgaccgcgccccagccccttgcaccgcagcccctgatgccgctc
accttcccgctgcacggcagccgcctgatcgaggcgagcgcaggcaccggcaagaccttc
acgatcgccgcgctctatgtgcgcctcgtgctcggccacggcggtgacgccgccttcgcg
cgcccgctgaccccgcccgagatcctcgtcgtgaccttcacggatgccgcgaccaaggaa
ctgcgcgatcgcatccgcgcgcggctcgccgaaggcgccgagtacttctttgccgatccg
ctcgccgtcgggccgaaagagcccggcaaggacttcctgcacgacctgcgcgccgagtat
ccggaggaagcctggcccggctgcgcgcgcaagctgcagctcgccgccgagtggatggac
gaggccgccgtgtcgacgatccacggctggtgcaagcgcatgctgagcgagcatgccttc
gacagcgacagcctcttcacgcaacgcctcgaaaccgaccagcgagaactcctcgccgag
gtcgtgcgcgacttctggcggaccttcttcgcgccgctcgatgcagaagacgtcggcgag
attgcgcgctggtggcagacgcccgacgagctgcaggggcagctcggcaagctgctggag
cacgcagagggcttgccggacgcagcgccaccggtcgaatcgatcgctgccgcacgcgcc
gagaaggccaaaaagcttgcacagctgaaagcgccctggccggactggacccaggagctg
gaggcactcctcgacgcagcggtcgcagcgaagcaggtcgtaggcagcaagatccagaag
cgttactaccagccctggctcgatgcgctcgccgcatgggccgcggaccctgccgcggac
gcgctcgacctgaagaaagggtgggaacgcctgagccggcacgggctggccgatgcctgg
aaggacggcgacccgcccgatcatcccgccctcgacgcgatccccgcgctaagggccgcg
ctggccgatcttccccacgcccacgccgagctactgcgcttcgccgcgcgctgggtcgcg
gcgcgcttcgccgccgagcagcagcgccacgcgcagatgggcttcaacgatctgctgacc
cggctcgacgccgcgctgcgccagcccaacggcaagcggctcgccgaagtcatccgtgcg
cagttcccggtcgcgctgatcgacgaattccaggacaccgacccggtccaataccgcatc
ttcgacgccgtctaccgcatcgccgacaacgcgccggacaccggcctcgtgctgatcggc
gaccccaagcaggcgatctacgccttccggggcgccgatatcttcacctacctcgcggcg
cgcgaagcgaccggcggacggctctacacgctcggcaccaactaccgctcgaccgtgact
atggtcaccgccgtcaaccgctgcttcgagcaggccgaagggcgcgacacgggcgagggt
gccttcctcttccggacgatggaaggcaaccgcgtgcccttcctcccggtcgccgcgagc
gggcggcgcgagcggctcgtcgtcggcgacgcggccgttccggcgctgacctgctggacg
ctggaagcgcccgagtccggcaaggtgctcggcgtcggcgcctatcgcggcagtatggcc
gcggcctgcgccgccgagatcgtccgcctgctgaacctcggccagcgcggccgtgcgggt
ttcttgcgcgatggcgagctcgccggcttgcgtcccgccgacatcgcgatcctcgtcaac
aaccgcaccgaggccaacgccgtgcgggaagccctcgccgcgtgcggcgtgcgcagcgtc
tacctctccgaccaggaatccgtgttcgcgagcgcccaggctgccgaactccagctgtgg
ctctccgcctgcgccgaaccggacgacgacagcctgctgcgtgccgccctcgcgaccgcg
agcctcggcctgccgtgggaggcgctcgaccgcctgcggctcgacgagctcgagtgggaa
gaccgcgtgctgcagttccgcgaataccgacagtgctggcgcgagcagggcgtgctgccg
atgctgcggcggctgctcggcgacttcgacgtgccgcggcgcctccttgcctgcgcggac
ggcgaacgtgcgctgaccgacctgctgcatctggccgaactgctgcagcacgccagcgtc
gccctcgacggcgaacatgcgctgatccgtcatctcgccgaacagcgcgcggacgccggc
aacggcgacgacgcgcgcaagctccgcctggagagcgacgccgacctcgtccaggtcgtc
acgatccacaagtccaagggcctcgaatacccgctcgtcttcctgcccttcgcctgcgcc
ttccgcgagacctcgtccgacgagctgccgctgaagtggcacgacgcggccggacgcctg
cacctgacgctcgcggccgacgcagccgccgccgggctcgccgaccgcgaacggctcggc
gaggatctgcgcaagttctacgtcgcgctgacccgcgcccgccacgcgacctggctcggc
ttcgcgcccgtcgacggcctgcaccgcagcgcgccgggctacctcctcaaggggggcgcg
acgatcgcgccggattccctcgccgcgacgctcgtcgagttcaagggcgagtgcgaagac
attgcgatcgccgccgcccccgcgctgtccggccaacgcttcgtcccgcacgccgcccgc
gtcgagatcggccccgcccgcacgccccgccgcgcggtgcgcgaattctggtggatcgcg
agctactccggcctgcgcacggaggagggcgccgcagccgaagccccgacccaggctgcc
gcgacgccgatcgccgccgatactcccgccgaagaaaccttcgccgaaatcctcgacgaa
gcccctgtcgcggaggccgcgatcgcgcccgaagacgacacgcgcctgcaccgcttcgcg
cgcggtgccgggcccggcaccttcctccacgaactcctcgaatgggccgcccgcgaaggc
ttcgggcgcgtcgccgcgcggcccgagcgcgcccgcgacatgatcgcgcgccgctgcgcc
gtgcgcggctggagccactggacggagccgctcaccggctggctgctgcacttcatcacg
acgccgctgccgctgcccgacggcgccacgccccgtttcgcggacctcgccggctgtcgg
cccgagatggaattctggttcgagacccaccacgcgaacctgtcccgcctcgacgccctc
gtgcgcgaacacacgctcgccgccgccccgcgcccggcgctcgtcccaggccagctcaac
ggcatgctgaagggcttcatcgacctcgtcttcgaataccgggggcgctactacgtggcc
gactacaaatcgaactggttcggccccgacgacgcggcctacacggcggacgcgatgcgc
gacgccgtcctcgcgaagcgctacgaactgcaatacgtgctctacctcttcgcgctgcac
cgcctgctcaagtcgcgcctgcccgactacgactacgaccgccacgtcggcggcgccgtc
tacctcttcctccgcggcagccacgcgccgacgcgcggcctgcactgcgagcgcccgccg
cggaccttgatcgaggcgctcgatgccgaattcggcgagcgcgtcgccgcgccggaggcc
tgccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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