KEGG T00609: AZC

Azorhizobium caulinodans: AZC_2824

Entry

AZC_2824          CDS       T00609

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

azc Azorhizobium caulinodans

Brite

KEGG Orthology (KO) [BR:azc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azc03400]
    AZC_2824
Enzymes [BR:azc01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     AZC_2824
DNA repair and recombination proteins [BR:azc03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    AZC_2824
Prokaryotic type
    AZC_2824

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase Usp

Other DBs

NCBI-ProteinID:

BAF88822

RhizoBase:

AZC_2824

UniProt:

A8I9R8

Position

3214405..3215859

AA seq 484 aa
MSAAGTAVIWFRDDLRLADNPALAAAAASGRRVLALYVLDEDSPGVRALGGAALWWLAGS
LRALKAELGQHGVPLVLRRGEAGRIVPDVARAAGADLVAFNWRAGKAEQAVDEAVARHLS
AAGVTVERTLGHLLHAPGSVRGTGGGLPRTFSSFMRAAVKGRDIGRTLPVPRLNGAAPLP
CDDLEEWALEPTQPDWAGGLRTTWHPGEAAARARLEAFLADGLAGYGEGRDRPDQTHVSR
LSPYLRFGEISPRQVLLAALAAGDAGTVPAKDVQKFEAELYWREFSHHLLFAVPDLARRN
LQASFDAFPWRECPGDLKKWQKGRTGYPIVDAGMRQLWQTGWMHNRVRMIVASFLCKHLL
LPWQDGELWFWDTLVDADLANNAASWQWVAGSGADAAPYFRIFNPVLQGEKFDPEGTYVR
TYVPELKDVPARLIHQPWSAPLELTRYGVRLGRDYPEPMVEHGAARDRALRAFEHTRKDL
RSAG

NT seq 1455 nt +upstreamnt +downstreamnt
atgagcgccgccggcaccgccgtcatctggttccgagacgacctgcgccttgcggacaat
cccgcgctcgccgccgcggccgccagcgggcggcgggtcctcgcgctttatgtgctggac
gaggacagccccggcgtccgcgcgctcggcggcgccgcgctctggtggctggcgggatcg
ctgcgggcgctgaaggcggaactcggccagcatggcgtgcccctcgtgctgcggcggggg
gaggccgggcgcatcgtgccggacgtggcgcgtgccgcgggtgccgacctcgtcgccttc
aactggcgggcgggcaaggcggagcaggcggtggacgaggcggtggcccgccatctttcg
gccgccggcgtgacggtggagcgcacgctcggccatctgctccacgcgcccggcagcgtg
cggggcacgggcggcggcctgccgcgcaccttctcctccttcatgcgggcggcggtgaag
gggcgcgacatcggccgcaccctgcccgttccgcgcctcaacggcgccgcgcccctgccc
tgcgatgatctggaggagtgggcgcttgagccgacacagcccgactgggccggcggactg
cgcaccacatggcatcccggcgaagcggcggcgcgagcccggctcgaagccttcctcgcc
gatggtcttgccggctatggcgaaggccgcgaccggccggaccagacccatgtgtcgcgc
ctttcgccctatctgcgcttcggggagatctcgccccggcaggtgctgctggcggcgctc
gccgcgggcgatgcgggcaccgtcccggccaaggacgtgcagaagttcgaggccgagctc
tactggcgggaattctcccaccatctcctctttgcggtgccggacctcgcgcgccgcaac
ctgcaagcctccttcgacgccttcccgtggcgcgaatgccccggcgacctcaagaaatgg
cagaagggccgcaccggctatcccatcgtggacgcgggcatgcgccagctctggcagacc
ggctggatgcacaatcgcgtgcgcatgatcgtcgcctccttcctctgcaagcacctcctg
ttgccctggcaggatggcgaactgtggttctgggacacgctggtggatgcggacctcgcc
aacaatgccgcaagctggcagtgggtggcgggctcgggcgccgacgccgcgccctatttc
cgcatcttcaatccggtgcttcagggcgagaaattcgatcccgagggcacctatgtgcgc
acctatgtgcccgagctgaaggacgtgcccgcccgcctcatccaccagccctggagcgcg
ccgctggagttgacgcgatacggcgtgcggctcggccgcgactatcccgagcccatggtg
gagcatggcgccgcccgcgacagagcgctgcgggcattcgagcatacccgcaaggatctg
cgctcggcgggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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